BLASTX nr result

ID: Angelica23_contig00000428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00000428
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516025.1| Photosystem I reaction center subunit VI, ch...   187   3e-45
ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Popu...   186   6e-45
ref|NP_001236618.1| uncharacterized protein LOC100499832 [Glycin...   177   3e-42
sp|O04006.1|PSAH_BRARA RecName: Full=Photosystem I reaction cent...   177   3e-42
emb|CAA43841.1| photosystem I psaH protein [Nicotiana sylvestris]     176   8e-42

>ref|XP_002516025.1| Photosystem I reaction center subunit VI, chloroplast precursor,
           putative [Ricinus communis] gi|223544930|gb|EEF46445.1|
           Photosystem I reaction center subunit VI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 144

 Score =  187 bits (476), Expect = 3e-45
 Identities = 93/125 (74%), Positives = 102/125 (81%)
 Frame = +1

Query: 187 MASLASFAAVQPINIKGLAGSSLTGTKLHIKPSCQSFKPITYKSGAVVAKYGDKSVYFDL 366
           MASLA+FAAVQP  +KGL GSSLTGTKLH+KPS QS +P   ++GAV AKYGDKSVYFDL
Sbjct: 1   MASLATFAAVQPATVKGLGGSSLTGTKLHVKPSRQSLRPKNRRNGAVEAKYGDKSVYFDL 60

Query: 367 EDLGNTTGQWDLYGSDAPSPYPPIQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYVSSQ 546
           EDLGNTTGQWDLYGSDAPSPY P+QSKFFETFAAPFTKR            STLAY+S+ 
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYLSAT 120

Query: 547 ATGDV 561
           ATGDV
Sbjct: 121 ATGDV 125


>ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Populus trichocarpa]
           gi|118487059|gb|ABK95360.1| unknown [Populus
           trichocarpa] gi|222841638|gb|EEE79185.1| hypothetical
           protein POPTRDRAFT_712066 [Populus trichocarpa]
          Length = 144

 Score =  186 bits (473), Expect = 6e-45
 Identities = 92/125 (73%), Positives = 102/125 (81%)
 Frame = +1

Query: 187 MASLASFAAVQPINIKGLAGSSLTGTKLHIKPSCQSFKPITYKSGAVVAKYGDKSVYFDL 366
           MASLA+FAAVQP  IKGL GSSL+GTKLH+KPS Q  +P + +SGAVVAKYGDKSVYFDL
Sbjct: 1   MASLATFAAVQPATIKGLGGSSLSGTKLHVKPSRQGLRPKSLRSGAVVAKYGDKSVYFDL 60

Query: 367 EDLGNTTGQWDLYGSDAPSPYPPIQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYVSSQ 546
           EDLGNTTGQWDLYGSDAPSPY P+QSKFFETFAAPFTKR            STLAY S+ 
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120

Query: 547 ATGDV 561
           A+GD+
Sbjct: 121 ASGDI 125


>ref|NP_001236618.1| uncharacterized protein LOC100499832 [Glycine max]
           gi|255627007|gb|ACU13848.1| unknown [Glycine max]
          Length = 144

 Score =  177 bits (450), Expect = 3e-42
 Identities = 90/125 (72%), Positives = 98/125 (78%)
 Frame = +1

Query: 187 MASLASFAAVQPINIKGLAGSSLTGTKLHIKPSCQSFKPITYKSGAVVAKYGDKSVYFDL 366
           MASLA+ AAVQP  I GLAGSSL+GTKL  KPS  S K   ++SGAVVAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPATINGLAGSSLSGTKLSFKPSRHSVKSKNFRSGAVVAKYGDKSVYFDL 60

Query: 367 EDLGNTTGQWDLYGSDAPSPYPPIQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYVSSQ 546
           EDLGNTTGQWDLYGSDAPSPY P+QSKFFETFAAPFTKR            STLAY S+ 
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120

Query: 547 ATGDV 561
           A+GD+
Sbjct: 121 ASGDI 125


>sp|O04006.1|PSAH_BRARA RecName: Full=Photosystem I reaction center subunit VI,
           chloroplastic; Short=PSI-H; AltName:
           Full=Light-harvesting complex I 11 kDa protein; Flags:
           Precursor gi|1916350|gb|AAB51159.1| PSI-H subunit
           [Brassica rapa]
          Length = 145

 Score =  177 bits (449), Expect = 3e-42
 Identities = 91/126 (72%), Positives = 100/126 (79%), Gaps = 1/126 (0%)
 Frame = +1

Query: 187 MASLASFAAVQPIN-IKGLAGSSLTGTKLHIKPSCQSFKPITYKSGAVVAKYGDKSVYFD 363
           MAS A+ AAVQP + +KGL GSSLTG KL IKPS QSFKP + ++GAVVAKYGDKSVYFD
Sbjct: 1   MASFATIAAVQPYSAVKGLGGSSLTGAKLFIKPSRQSFKPKSTRAGAVVAKYGDKSVYFD 60

Query: 364 LEDLGNTTGQWDLYGSDAPSPYPPIQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYVSS 543
           LEDLGNTTGQWDLYGSDAPSPY P+QSKFFETFAAPFTKR            S L YVS+
Sbjct: 61  LEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120

Query: 544 QATGDV 561
            +TGDV
Sbjct: 121 SSTGDV 126


>emb|CAA43841.1| photosystem I psaH protein [Nicotiana sylvestris]
          Length = 145

 Score =  176 bits (446), Expect = 8e-42
 Identities = 90/126 (71%), Positives = 100/126 (79%), Gaps = 1/126 (0%)
 Frame = +1

Query: 187 MASLASFAAVQPI-NIKGLAGSSLTGTKLHIKPSCQSFKPITYKSGAVVAKYGDKSVYFD 363
           MASLA+FAAVQP  N+KGLAGSS+TGTKLH+K S  + KP   ++G VVAKYGDKSVYFD
Sbjct: 1   MASLAAFAAVQPTTNVKGLAGSSITGTKLHLKSSRLNLKPTKSRAGPVVAKYGDKSVYFD 60

Query: 364 LEDLGNTTGQWDLYGSDAPSPYPPIQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYVSS 543
           LEDLGNTTGQWDLYGSDAPSPY  +QSKFFETFAAPFTKR            STLAY SS
Sbjct: 61  LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSS 120

Query: 544 QATGDV 561
            A+GD+
Sbjct: 121 TASGDI 126


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