BLASTX nr result

ID: Angelica23_contig00000398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00000398
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451621.1| hypothetical protein SORBIDRAFT_04g004770 [S...   403   e-110
emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-b...   401   e-109
gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopers...   401   e-109
ref|NP_001148183.1| chlorophyll a-b binding protein 6A [Zea mays...   400   e-109
ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6...   397   e-108

>ref|XP_002451621.1| hypothetical protein SORBIDRAFT_04g004770 [Sorghum bicolor]
           gi|241931452|gb|EES04597.1| hypothetical protein
           SORBIDRAFT_04g004770 [Sorghum bicolor]
          Length = 245

 Score =  403 bits (1036), Expect = e-110
 Identities = 186/205 (90%), Positives = 197/205 (96%)
 Frame = -1

Query: 909 TSSKFTMSAEWMPGQPRPAHLDGSTPGDFGFDPLGLATVPENFERFKESELYHCRWAMLA 730
           TS + TMSAEWMPGQPRPAHLDGS+PGDFGFDPLGLATVPENFERFKESE+YHCRWAMLA
Sbjct: 39  TSGRVTMSAEWMPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLA 98

Query: 729 VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRS 550
           VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWG+LPTIL IEF+AIAF EHQR+
Sbjct: 99  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGSLPTILVIEFVAIAFAEHQRT 158

Query: 549 MEKDIEKKKYPGGAFDPLGYSKDPKKFEEMKLKEVKNGRLAMLAFVGFCVQQSAYPGTGP 370
           MEKD EKKKYPGGAFDPLG+SKDP KFEE KLKE+KNGRLAMLAFVGFCVQQSAYPGTGP
Sbjct: 159 MEKDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGP 218

Query: 369 LENLATHLADPWHNNIGNIVIPRGL 295
           LENLATHLADPWHNNIG+I+IPR +
Sbjct: 219 LENLATHLADPWHNNIGDIIIPRSI 243


>emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
            [Nicotiana tabacum]
          Length = 245

 Score =  401 bits (1031), Expect = e-109
 Identities = 191/244 (78%), Positives = 211/244 (86%)
 Frame = -1

Query: 1026 MASQSLMSCGVAXXXXXXXXXXXXXXXXXXPMSLVSANGTSSKFTMSAEWMPGQPRPAHL 847
            MAS +LMSCG+A                  P+ + + +G +S+F+MSAEWMPGQPRP +L
Sbjct: 1    MASNTLMSCGIAAVSPSVLSSSYSKFAVAVPVCVGAVSG-NSRFSMSAEWMPGQPRPPYL 59

Query: 846  DGSTPGDFGFDPLGLATVPENFERFKESELYHCRWAMLAVPGILVPEALGLGNWVKAQEW 667
            DGS PGDFGFDPLGL  VP N ER+KESEL HCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 60   DGSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 119

Query: 666  AAVPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDIEKKKYPGGAFDPLGYS 487
            AA+PGGQATYLG PVPWGTLPTILAIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYS
Sbjct: 120  AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 179

Query: 486  KDPKKFEEMKLKEVKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNIVI 307
            KDPKKFEE+K+KE+KNGRLA+LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIG+++I
Sbjct: 180  KDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVII 239

Query: 306  PRGL 295
             RG+
Sbjct: 240  LRGI 243


>gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
            gi|225895|prf||1402358A photosystem I protein CAB
          Length = 246

 Score =  401 bits (1030), Expect = e-109
 Identities = 189/244 (77%), Positives = 210/244 (86%)
 Frame = -1

Query: 1026 MASQSLMSCGVAXXXXXXXXXXXXXXXXXXPMSLVSANGTSSKFTMSAEWMPGQPRPAHL 847
            MAS +LMSCG+                   P+S V A  + S+F+MSA+WMPGQPRP++L
Sbjct: 1    MASNTLMSCGIPAVCPSFLSSTKSKFAAAMPVS-VGATNSMSRFSMSADWMPGQPRPSYL 59

Query: 846  DGSTPGDFGFDPLGLATVPENFERFKESELYHCRWAMLAVPGILVPEALGLGNWVKAQEW 667
            DGS PGDFGFDPLGL  VP N ER+KESEL HCRWAMLAVPGI+VPEALGLGNWVKAQEW
Sbjct: 60   DGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEW 119

Query: 666  AAVPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDIEKKKYPGGAFDPLGYS 487
            AA+PGGQATYLG PVPWGTLPTILAIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYS
Sbjct: 120  AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYS 179

Query: 486  KDPKKFEEMKLKEVKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNIVI 307
            KDP KFEE+K+KE+KNGRLA+LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIG+++I
Sbjct: 180  KDPAKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVII 239

Query: 306  PRGL 295
            P+G+
Sbjct: 240  PKGI 243


>ref|NP_001148183.1| chlorophyll a-b binding protein 6A [Zea mays]
           gi|195612072|gb|ACG27866.1| chlorophyll a-b binding
           protein 6A [Zea mays] gi|195616508|gb|ACG30084.1|
           chlorophyll a-b binding protein 6A [Zea mays]
           gi|223975041|gb|ACN31708.1| unknown [Zea mays]
           gi|413935743|gb|AFW70294.1| chlorophyll a-b binding
           protein 6A [Zea mays]
          Length = 245

 Score =  400 bits (1028), Expect = e-109
 Identities = 185/205 (90%), Positives = 196/205 (95%)
 Frame = -1

Query: 909 TSSKFTMSAEWMPGQPRPAHLDGSTPGDFGFDPLGLATVPENFERFKESELYHCRWAMLA 730
           TS + TMSAEWMPGQPRPAHLDGS+PGDFGFDPLGLATVPENFERFKESE+YHCRWAMLA
Sbjct: 39  TSGRVTMSAEWMPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLA 98

Query: 729 VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRS 550
           VPGILVPEALGLGNWVKAQEWAAVPGGQATYLG PVPWGTLPTIL IEF+AIAF EHQR+
Sbjct: 99  VPGILVPEALGLGNWVKAQEWAAVPGGQATYLGAPVPWGTLPTILVIEFVAIAFAEHQRT 158

Query: 549 MEKDIEKKKYPGGAFDPLGYSKDPKKFEEMKLKEVKNGRLAMLAFVGFCVQQSAYPGTGP 370
           MEKD EKKKYPGGAFDPLG+SKDP KFEE KLKE+KNGRLAMLAFVGFCVQQSAYPGTGP
Sbjct: 159 MEKDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGP 218

Query: 369 LENLATHLADPWHNNIGNIVIPRGL 295
           LENLA+HLADPWHNNIG+I+IPR +
Sbjct: 219 LENLASHLADPWHNNIGDIIIPRSI 243


>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
            [Cucumis sativus] gi|449525097|ref|XP_004169556.1|
            PREDICTED: chlorophyll a-b binding protein 6A,
            chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  397 bits (1021), Expect = e-108
 Identities = 191/242 (78%), Positives = 203/242 (83%)
 Frame = -1

Query: 1026 MASQSLMSCGVAXXXXXXXXXXXXXXXXXXPMSLVSANGTSSKFTMSAEWMPGQPRPAHL 847
            MAS +LMSCG+A                        A   SS+F+MSAEWMPGQPRP +L
Sbjct: 1    MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 846  DGSTPGDFGFDPLGLATVPENFERFKESELYHCRWAMLAVPGILVPEALGLGNWVKAQEW 667
            DGS PGDFGFDPLGL  VPEN ERFKESEL HCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61   DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 666  AAVPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDIEKKKYPGGAFDPLGYS 487
            AAVPGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYS
Sbjct: 121  AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 486  KDPKKFEEMKLKEVKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNIVI 307
            KDP+K +E K+KE+KNGRLA+LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIG+I+I
Sbjct: 181  KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 306  PR 301
            PR
Sbjct: 241  PR 242


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