BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00000357
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   400   e-109
ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|1...   389   e-106
ref|XP_003518749.1| PREDICTED: putative exosome complex componen...   382   e-104
ref|XP_004138110.1| PREDICTED: putative exosome complex componen...   374   e-101
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ...   370   e-100

>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  400 bits (1028), Expect = e-109
 Identities = 203/238 (85%), Positives = 218/238 (91%)
 Frame = +3

Query: 129 MEIAKPANYSIDKPVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAIKAGTLRFSKPNK 308
           ME   PA++ +D+ VVPGDVVLDLS M NQTIKLGGGL QDCD+IT  KAG LRFSKPNK
Sbjct: 1   MEDNTPASF-VDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNK 59

Query: 309 YWIESSQKRYVPSAGDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEV 488
           YW+ESSQKRYVP   DTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFE 
Sbjct: 60  YWVESSQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEA 119

Query: 489 GTLIYVRVVKANVGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACPVLE 668
           GTL+YVRVVKAN GMNPEL+C DASGKAAEFGPLKDGYMFESSTGLSRMLLSSP CPVLE
Sbjct: 120 GTLLYVRVVKANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLE 179

Query: 669 ALGKKLSFEIAVGLNGRVWVNAASPSTVILVSSAIMNSETLTGVQQKLMVEKLLQRTQ 842
           ALGKKLSFEIAVGLNGRVWVNA+SPSTVILV++AIMNSE+L+ VQQK+MV+KLLQR Q
Sbjct: 180 ALGKKLSFEIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237


>ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|118482713|gb|ABK93275.1|
           unknown [Populus trichocarpa]
           gi|222858717|gb|EEE96264.1| predicted protein [Populus
           trichocarpa]
          Length = 242

 Score =  389 bits (998), Expect = e-106
 Identities = 195/233 (83%), Positives = 214/233 (91%)
 Frame = +3

Query: 144 PANYSIDKPVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAIKAGTLRFSKPNKYWIES 323
           PA + ID  VVPGDVV+DLSSM+NQTIKLG GLRQDCD+I+ +KAG LRFSKPNKYW+E+
Sbjct: 9   PATF-IDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKPNKYWVET 67

Query: 324 SQKRYVPSAGDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLIY 503
           SQKRYVP A D+VLGIVVDSK+DNFL+DIKGPALAFLPVLAFEGGTRRNIPKFE GTL+Y
Sbjct: 68  SQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLY 127

Query: 504 VRVVKANVGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACPVLEALGKK 683
           VRVVKAN GMNPEL+C DASGKAAEFG LKDGYMFE STGLSRMLLSSP CPVLEALGKK
Sbjct: 128 VRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPVLEALGKK 187

Query: 684 LSFEIAVGLNGRVWVNAASPSTVILVSSAIMNSETLTGVQQKLMVEKLLQRTQ 842
           LSFEIAVGLNGRVWVNA SPS VI+V++AIMNSETL+GVQQK+M EKLLQ+ Q
Sbjct: 188 LSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKIQ 240


>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like [Glycine
           max]
          Length = 240

 Score =  382 bits (982), Expect = e-104
 Identities = 186/226 (82%), Positives = 211/226 (93%)
 Frame = +3

Query: 159 IDKPVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAIKAGTLRFSKPNKYWIESSQKRY 338
           +D+ V PGDV+LDLS+M+NQTIKLGGGLRQDCD+I+ +KAG LRFSKPNKYW+E+SQKRY
Sbjct: 13  VDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKPNKYWVENSQKRY 72

Query: 339 VPSAGDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLIYVRVVK 518
           VP A D+VLGIVVDS++DNFLVDIKGPALAFLPVLAFEGGTRRNIP+FE+GTLIY RVVK
Sbjct: 73  VPHAEDSVLGIVVDSRSDNFLVDIKGPALAFLPVLAFEGGTRRNIPRFEIGTLIYARVVK 132

Query: 519 ANVGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACPVLEALGKKLSFEI 698
           AN GMNPELAC DASGKAAEFG LKDGYMFE +TGLSRMLLSSP CPVL+ALGKKLSFEI
Sbjct: 133 ANPGMNPELACTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPVLDALGKKLSFEI 192

Query: 699 AVGLNGRVWVNAASPSTVILVSSAIMNSETLTGVQQKLMVEKLLQR 836
           AVGLNGRVWV+AASP T I+V++AIMNSETL+G QQ++MVEKLL+R
Sbjct: 193 AVGLNGRVWVSAASPQTTIVVANAIMNSETLSGAQQRIMVEKLLER 238


>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
           sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
           putative exosome complex component rrp40-like [Cucumis
           sativus]
          Length = 243

 Score =  374 bits (960), Expect = e-101
 Identities = 187/235 (79%), Positives = 213/235 (90%), Gaps = 3/235 (1%)
 Frame = +3

Query: 135 IAKPANYS---IDKPVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAIKAGTLRFSKPN 305
           + KP++ S   +D+PVVPGDVVLDLS+M+N+TIKLGGGLRQD D+I+  K G LRFSKPN
Sbjct: 2   VEKPSSSSSTLVDQPVVPGDVVLDLSNMANETIKLGGGLRQDQDAISVSKVGKLRFSKPN 61

Query: 306 KYWIESSQKRYVPSAGDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFE 485
           KYW+ESSQKRYVP A D VLGIV+DS+ADNFLVDIKGP+LAFLPVLAFEGGTRRNIPKFE
Sbjct: 62  KYWVESSQKRYVPCAEDCVLGIVLDSRADNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFE 121

Query: 486 VGTLIYVRVVKANVGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACPVL 665
           +G L+YVRVVK N GMNPELAC DASGKAA FG LKDGYMFE STGLSRMLLSSP+CPVL
Sbjct: 122 MGALLYVRVVKVNPGMNPELACTDASGKAAGFGLLKDGYMFECSTGLSRMLLSSPSCPVL 181

Query: 666 EALGKKLSFEIAVGLNGRVWVNAASPSTVILVSSAIMNSETLTGVQQKLMVEKLL 830
           E+LGKKLSFE AVGLNGRVWVNA SPST+I+VS+AI+NSETL+GVQQ++MV+KLL
Sbjct: 182 ESLGKKLSFETAVGLNGRVWVNADSPSTIIVVSNAILNSETLSGVQQRIMVDKLL 236


>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
           gi|217074508|gb|ACJ85614.1| unknown [Medicago
           truncatula] gi|355515294|gb|AES96917.1| Exosome complex
           exonuclease RRP40 [Medicago truncatula]
           gi|388510130|gb|AFK43131.1| unknown [Medicago
           truncatula]
          Length = 240

 Score =  370 bits (950), Expect = e-100
 Identities = 183/228 (80%), Positives = 206/228 (90%)
 Frame = +3

Query: 159 IDKPVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAIKAGTLRFSKPNKYWIESSQKRY 338
           +D+ V PGDVVLDLS+M+NQTIKLGGGLRQD D I+ +KAG LRFSKPNKYW+ESSQKRY
Sbjct: 13  VDQLVYPGDVVLDLSTMTNQTIKLGGGLRQDGDVISVMKAGRLRFSKPNKYWVESSQKRY 72

Query: 339 VPSAGDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLIYVRVVK 518
           VP A D+VLGI+VDS++DNFLVDIKGP LAFLPVLAFEGGTRRNIPKFEVG LIYVRVVK
Sbjct: 73  VPHAEDSVLGIIVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGALIYVRVVK 132

Query: 519 ANVGMNPELACMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPACPVLEALGKKLSFEI 698
           A  GMNPEL+C DASGKA EFG LK+GYMFE STGLSRMLLS+P CPVL+ LGKKLSFEI
Sbjct: 133 AIPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSTPTCPVLDTLGKKLSFEI 192

Query: 699 AVGLNGRVWVNAASPSTVILVSSAIMNSETLTGVQQKLMVEKLLQRTQ 842
           AVGLNGRVWVNA+SPST I+V++A++NSE L+GVQQK+M EKLLQR Q
Sbjct: 193 AVGLNGRVWVNASSPSTTIIVANALINSEVLSGVQQKIMAEKLLQRVQ 240