BLASTX nr result

ID: Angelica23_contig00000313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00000313
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus...   205   8e-51
ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloro...   194   2e-47
gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK4693...   182   5e-44
ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloro...   181   1e-43
ref|XP_002329074.1| predicted protein [Populus trichocarpa] gi|2...   180   3e-43

>ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus communis]
           gi|223528058|gb|EEF30134.1| 30S ribosomal protein S20,
           putative [Ricinus communis]
          Length = 185

 Score =  205 bits (522), Expect = 8e-51
 Identities = 117/186 (62%), Positives = 138/186 (74%), Gaps = 4/186 (2%)
 Frame = -1

Query: 664 MAAAVQCLSSSCWPISSKFQSLSLKTHNSCP---SAFKPLGFSSNTSVNVFSTGFVSIRP 494
           MAAA   + SSC+ + +K +SLSL T +S      A + L FSS  S +VF+ G +S+  
Sbjct: 1   MAAAA--VLSSCFSVPTKLKSLSLTTTSSSTITYPALRSLSFSSAISHDVFNKGCLSMSI 58

Query: 493 VERQLGQLIVCEAATTKKPDSAAKRARQSEKRRIYHKAHKSEVRTRMKKVLESLEVLRKK 314
           V+R +G  IVCEAA  K+ DSAAKRARQ+EKRRIYHKAHKSEVRTRMKKVLE+L+ LRKK
Sbjct: 59  VKRPIGHSIVCEAAPKKRADSAAKRARQAEKRRIYHKAHKSEVRTRMKKVLEALDDLRKK 118

Query: 313 TDAQPEEVITVEKLIAEAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAVEIHHGWYTPS 134
           +DAQ EEV+ +EKLIAEAYSVIDKAVKVGTLHRNTG            AVEIHHGWYTP+
Sbjct: 119 SDAQAEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYTPA 178

Query: 133 P-ELTA 119
           P E TA
Sbjct: 179 PAEATA 184


>ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Vitis
           vinifera] gi|302142967|emb|CBI20262.3| unnamed protein
           product [Vitis vinifera]
          Length = 183

 Score =  194 bits (492), Expect = 2e-47
 Identities = 105/172 (61%), Positives = 122/172 (70%), Gaps = 2/172 (1%)
 Frame = -1

Query: 631 CWPISSKFQSLSLK--THNSCPSAFKPLGFSSNTSVNVFSTGFVSIRPVERQLGQLIVCE 458
           C  + SKF+ LSL   + +SC   F  LGFSSN S  VFS G +SI  +       IVC+
Sbjct: 11  CLALPSKFRILSLNASSSSSCSVPFTSLGFSSNLSQTVFSKGRLSISTIRGPTHHSIVCD 70

Query: 457 AATTKKPDSAAKRARQSEKRRIYHKAHKSEVRTRMKKVLESLEVLRKKTDAQPEEVITVE 278
           AA  +K DSAAKR RQ+EKRRIY+KA KSE+RTRMKKVLE L+ L+KK DAQ EEV+ +E
Sbjct: 71  AAPMRKADSAAKRVRQAEKRRIYNKARKSEIRTRMKKVLEELDGLKKKPDAQAEEVLPIE 130

Query: 277 KLIAEAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAVEIHHGWYTPSPELT 122
           KLIAEAYSVIDKAVKVGTLHRNTG            AVEIHHGWYTP+P +T
Sbjct: 131 KLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYTPAPPVT 182


>gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK46938.1| unknown
           [Lotus japonicus]
          Length = 177

 Score =  182 bits (463), Expect = 5e-44
 Identities = 101/175 (57%), Positives = 122/175 (69%), Gaps = 1/175 (0%)
 Frame = -1

Query: 658 AAVQCLSSSCWPISSKFQSLS-LKTHNSCPSAFKPLGFSSNTSVNVFSTGFVSIRPVERQ 482
           AAV C   S   + SKF+ LS   + +S  S    L F  N S  VFS G +S+ PV+R+
Sbjct: 2   AAVSC---SWLTLPSKFRDLSPASSSSSSISNSASLSFCRNISHTVFSQGSLSLSPVQRR 58

Query: 481 LGQLIVCEAATTKKPDSAAKRARQSEKRRIYHKAHKSEVRTRMKKVLESLEVLRKKTDAQ 302
              L+VCE  T KK DSA KRARQ+EKRRIY+KA KSE++TRMKKVLE+LE L+KK+DAQ
Sbjct: 59  T--LVVCEVVTKKKVDSAIKRARQAEKRRIYNKARKSEIKTRMKKVLEALESLKKKSDAQ 116

Query: 301 PEEVITVEKLIAEAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAVEIHHGWYTP 137
           PEE++ +EKLI EAYSVIDKA++VGTLHRNTG             VEIHHGWYTP
Sbjct: 117 PEEILPIEKLIGEAYSVIDKAIRVGTLHRNTGGHRKSRLARRKKVVEIHHGWYTP 171


>ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Cucumis
           sativus] gi|449507080|ref|XP_004162928.1| PREDICTED: 30S
           ribosomal protein S20, chloroplastic-like [Cucumis
           sativus]
          Length = 184

 Score =  181 bits (460), Expect = 1e-43
 Identities = 103/187 (55%), Positives = 124/187 (66%), Gaps = 6/187 (3%)
 Frame = -1

Query: 661 AAAVQCLSSSCWPISSKFQSLSLKTHNSC------PSAFKPLGFSSNTSVNVFSTGFVSI 500
           AAA+ C S     +SSKF +LSL   +S        S  + L FSSN S++ FS G +S+
Sbjct: 3   AAAITCFS-----LSSKFGNLSLNGFSSSIPAAPSSSTLRSLSFSSNISLSAFSNGCLSM 57

Query: 499 RPVERQLGQLIVCEAATTKKPDSAAKRARQSEKRRIYHKAHKSEVRTRMKKVLESLEVLR 320
           R  ER     +VCEAA   K DSAAKRARQ+EKRRIY+KA KSE++TRMKKVLE+L+ L+
Sbjct: 58  RKTERLHRYSVVCEAAPKSKVDSAAKRARQAEKRRIYNKARKSEIKTRMKKVLEALDGLK 117

Query: 319 KKTDAQPEEVITVEKLIAEAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAVEIHHGWYT 140
           KK +AQ EEV+ +E LIAEAYSVIDKAV+ GTLHRNT             AVEIHHGWYT
Sbjct: 118 KKAEAQSEEVLPIETLIAEAYSVIDKAVRAGTLHRNTAARRKSRLARRKKAVEIHHGWYT 177

Query: 139 PSPELTA 119
           P     A
Sbjct: 178 PDSPAAA 184


>ref|XP_002329074.1| predicted protein [Populus trichocarpa] gi|222869743|gb|EEF06874.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  180 bits (456), Expect = 3e-43
 Identities = 95/172 (55%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
 Frame = -1

Query: 643 LSSSCWPISSKFQSLSLKTHNSCPSAFKPLGFSSNTSVNVFSTGFVSIRPVERQLGQL-I 467
           L S C  +  K ++LSL +     S F  L FSS+ S ++F+ G +S+R  +R +    I
Sbjct: 5   LLSPCLGLPPKLKNLSLNSTTCSTSTFSSLSFSSSLSHSIFNKGCLSMRTTQRSIHNFSI 64

Query: 466 VCEAATTKKPDSAAKRARQSEKRRIYHKAHKSEVRTRMKKVLESLEVLRKKTDAQPEEVI 287
           VCE+   KK DSA KR RQ+EKRR+Y+KA KSEV+TRMKKVLE+L+ L+KK +AQ EEV+
Sbjct: 65  VCESTPKKKADSAEKRTRQAEKRRVYNKARKSEVKTRMKKVLEALDDLKKKPEAQFEEVL 124

Query: 286 TVEKLIAEAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAVEIHHGWYTPSP 131
            +EKLIAEAYSVIDKA+KVGTLHRNTG            AVEIHHGWY+P+P
Sbjct: 125 PIEKLIAEAYSVIDKAIKVGTLHRNTGARRKSRLARRKKAVEIHHGWYSPAP 176


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