BLASTX nr result
ID: Angelica23_contig00000257
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00000257
(1984 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 461 e-127
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 451 e-124
ref|XP_002308586.1| predicted protein [Populus trichocarpa] gi|2... 431 e-118
emb|CAD20832.1| sigma factor [Spinacia oleracea] 374 e-101
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 374 e-101
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 461 bits (1187), Expect = e-127
Identities = 259/567 (45%), Positives = 350/567 (61%), Gaps = 7/567 (1%)
Frame = -3
Query: 1805 MGIGFRLNFRWASSVKYPYYXXXXXXXXXXXSFKGMEASYDTARVSFPYIVLGETETMHN 1626
MG+GFRLN +W + P +G EAS+D+ R SFP + + E+++
Sbjct: 1 MGMGFRLNLKWDFPISCPTLTNSPSRLCTSSV-QGKEASFDSTRFSFPSVTSEDCESLYK 59
Query: 1625 DHLRAHSCPSAA-HTLSNDYLETEHIIIRKSTCA--DISCIINCNFRKPDEANQYTSATS 1455
D + +C S A T NDY E + ++ C+ D+ I+N + + P + S
Sbjct: 60 DPFKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIVNAS-QAPIGEDISASVAG 118
Query: 1454 VQASKVSHFGVLMNNLNMLEKTFAESDALRLENDILSQLDRLGALKLFYSCLSRTRSPPV 1275
+QASK S F +L+ NL++LE+ FA+S+ +RLE DI+ QL RLGALKLF CLSRT
Sbjct: 119 LQASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTST 178
Query: 1274 N----SLVTEYIQEHQMKSDVNDQMAKIVXXXXXXXXXXXXXXXXXXXXKDVYLLXXXXX 1107
+ S TE+I+E Q V+D + K+V ++Y
Sbjct: 179 SFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSK 238
Query: 1106 XXXXXXTKHVHHHNQNLXXXXXXXXXXXXRPKLTRNEAELTAGVKLLADLEKIKTLLEKE 927
+ ++ R +NEAE++ GVKL+A+LE+I+ LE+E
Sbjct: 239 TIRKGPGR------PSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEE 292
Query: 926 TGKTASLSSWAEAAQVDKKTLQQNLHFGCYCKDELLRSARSLIVYIARNYRGLGVGFEDL 747
G ASLS+WAEAA VDKK LQQ L FG YC+DELLRS SL++YIARNYRG+GV FED+
Sbjct: 293 IGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDI 352
Query: 746 IQAGSIGVLQGAERFDHTRGCRFSTYIQYWIKKSILMLVERNCRGVRIPYALSKTMKKIQ 567
+QAG++GVLQGAERFDHT+G RFSTY+QYWI+KS+ LV R+ RGV+IP+ L++ + +IQ
Sbjct: 353 LQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQ 412
Query: 566 KARKTLSNSLGTYPDDYEIAKSTGISLSKITSASNSLRVIGSLDRKIGDFTNVKCLELMP 387
KARK L S G YPDD EIAK TG+SL+KI SA N LRV+GS D+ D LE P
Sbjct: 413 KARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTP 472
Query: 386 DTSIKGPEETVTRQHLLKDMYNLLEELNPRERQVLLLRLGLEDNHCMSLQEIGRLYSVSK 207
DTSIK PEE +Q KD++NLL+ L+PRERQ+L+LR G + SL+EIGR ++VSK
Sbjct: 473 DTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSK 532
Query: 206 EWIRKIERTALTKLRDQETLHSLNHYL 126
EWIRK+E+TAL LRD+E +L HY+
Sbjct: 533 EWIRKLEKTALANLRDEEICQNLRHYV 559
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 451 bits (1159), Expect = e-124
Identities = 250/534 (46%), Positives = 338/534 (63%), Gaps = 7/534 (1%)
Frame = -3
Query: 1706 KGMEASYDTARVSFPYIVLGETETMHNDHLRAHSCPSAA-HTLSNDYLETEHIIIRKSTC 1530
+G EAS+D+ R SFP + + E+++ D + +C S A T NDY E + ++ C
Sbjct: 83 QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKC 142
Query: 1529 A--DISCIINCNFRKPDEANQYTSATSVQASKVSHFGVLMNNLNMLEKTFAESDALRLEN 1356
+ D+ I+N + + P + S +QASK S F +L+ NL++LE+ FA+S+ +RLE
Sbjct: 143 SHGDLFKIVNAS-QAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 201
Query: 1355 DILSQLDRLGALKLFYSCLSRTRSPPVN----SLVTEYIQEHQMKSDVNDQMAKIVXXXX 1188
DI+ QL RLGALKLF CLSRT + S TE+I+E Q V+D + K+V
Sbjct: 202 DIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSG 261
Query: 1187 XXXXXXXXXXXXXXXXKDVYLLXXXXXXXXXXXTKHVHHHNQNLXXXXXXXXXXXXRPKL 1008
++Y + ++ R
Sbjct: 262 KKEERKSKRERALEKADNIYAFPLPSKTIRKGPGR------PSVSTVKRTLNSRRKRLMN 315
Query: 1007 TRNEAELTAGVKLLADLEKIKTLLEKETGKTASLSSWAEAAQVDKKTLQQNLHFGCYCKD 828
+NEAE++ GVKL+A+LE+I+ LE+E G ASLS+WAEAA VDKK LQQ L FG YC+D
Sbjct: 316 AKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRD 375
Query: 827 ELLRSARSLIVYIARNYRGLGVGFEDLIQAGSIGVLQGAERFDHTRGCRFSTYIQYWIKK 648
ELLRS SL++YIARNYRG+GV FED++QAG++GVLQGAERFDHT+G RFSTY+QYWI+K
Sbjct: 376 ELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRK 435
Query: 647 SILMLVERNCRGVRIPYALSKTMKKIQKARKTLSNSLGTYPDDYEIAKSTGISLSKITSA 468
S+ LV R+ RGV+IP+ L++ + +IQKARK L S G YPDD EIAK TG+SL+KI SA
Sbjct: 436 SMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSA 495
Query: 467 SNSLRVIGSLDRKIGDFTNVKCLELMPDTSIKGPEETVTRQHLLKDMYNLLEELNPRERQ 288
N LRV+GS D+ D LE PDTSIK PEE +Q KD++NLL+ L+PRERQ
Sbjct: 496 GNCLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQ 555
Query: 287 VLLLRLGLEDNHCMSLQEIGRLYSVSKEWIRKIERTALTKLRDQETLHSLNHYL 126
+L+LR G + SL+EIGR ++VSKEWIRK+E+TAL LRD+E +L HY+
Sbjct: 556 ILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRDEEICQNLRHYV 609
>ref|XP_002308586.1| predicted protein [Populus trichocarpa] gi|222854562|gb|EEE92109.1|
predicted protein [Populus trichocarpa]
Length = 559
Score = 431 bits (1109), Expect = e-118
Identities = 249/566 (43%), Positives = 347/566 (61%), Gaps = 6/566 (1%)
Frame = -3
Query: 1805 MGIGFRLNFRWASSVKYPYYXXXXXXXXXXXSFKGMEASYDTARVSFPYIVLGETETMHN 1626
MG+GFRL +W S ++ + S +GMEAS + AR+SF +V E + ++
Sbjct: 1 MGVGFRLTPKWGSPMQ-SHSATNSTSMFSSFSARGMEASVNQARLSFLSVVSEEGDILNK 59
Query: 1625 DHLRAHSCPSAAHTLSNDYLETEHIIIRKSTCADISCIINC--NFRKPDEANQYTSATSV 1452
++ +C SAA + ND L+ E + + + +S I N N + E TS T +
Sbjct: 60 HSFKSFACSSAAQNVENDCLQMERLKMNVDKTSHVS-INNMMGNDKVSVEEEISTSHTRL 118
Query: 1451 QASKVSHFGVLMNNLNMLEKTFAESDALRLENDILSQLDRLGALKLFYSCLSRTRSPP-- 1278
+ S L++NL+ LEK A+ DAL+LE DIL QL RLGAL+ F +CLSRT
Sbjct: 119 RERMTSRISFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSNV 178
Query: 1277 --VNSLVTEYIQEHQMKSDVNDQMAKIVXXXXXXXXXXXXXXXXXXXXKDVYLLXXXXXX 1104
++++ TE E + + D K V
Sbjct: 179 LDLSAVPTENTGESKTDGMLGDLTGKTVVRTGKKEERKFRRERAASDNGK-------KTT 231
Query: 1103 XXXXXTKHVHHHNQNLXXXXXXXXXXXXRPKLTRNEAELTAGVKLLADLEKIKTLLEKET 924
+K V ++ R + RNEA++T GVK+ +DLE+I+T LE+ET
Sbjct: 232 SLSLPSKTVQNNLPKPTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEET 291
Query: 923 GKTASLSSWAEAAQVDKKTLQQNLHFGCYCKDELLRSARSLIVYIARNYRGLGVGFEDLI 744
G+ SLS WAEA +DKK LQQ L FG YC+DEL+++ SL++YIARNYRG+G+ EDLI
Sbjct: 292 GQVVSLSCWAEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLI 351
Query: 743 QAGSIGVLQGAERFDHTRGCRFSTYIQYWIKKSILMLVERNCRGVRIPYALSKTMKKIQK 564
QAG++G+LQGAERFD TRG RFSTY+QYWI+KS+L +VER+ RG++IPYALS+++ KIQK
Sbjct: 352 QAGNLGLLQGAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSINKIQK 411
Query: 563 ARKTLSNSLGTYPDDYEIAKSTGISLSKITSASNSLRVIGSLDRKIGDFTNVKCLELMPD 384
ARK LSNS G YPDD+E+AK TG+SL+KI SA LRV+ SLD+KIG+ K E +PD
Sbjct: 412 ARKALSNSHGRYPDDWEVAKFTGLSLAKIESAQKCLRVVASLDQKIGEGHYAKYSEFIPD 471
Query: 383 TSIKGPEETVTRQHLLKDMYNLLEELNPRERQVLLLRLGLEDNHCMSLQEIGRLYSVSKE 204
SI+ PEE V RQH+ +++Y+LL L+ RE+QV++LR G +DN SL EIGRL+ VSKE
Sbjct: 472 MSIQNPEEAVMRQHMREEIYDLLRGLDSREKQVMVLRYGFKDNQPKSLAEIGRLFRVSKE 531
Query: 203 WIRKIERTALTKLRDQETLHSLNHYL 126
+RKIE+ + KLRD+ +L+ Y+
Sbjct: 532 RVRKIEKKIMIKLRDEGIRRNLSRYM 557
>emb|CAD20832.1| sigma factor [Spinacia oleracea]
Length = 548
Score = 374 bits (960), Expect = e-101
Identities = 174/295 (58%), Positives = 238/295 (80%)
Frame = -3
Query: 1010 LTRNEAELTAGVKLLADLEKIKTLLEKETGKTASLSSWAEAAQVDKKTLQQNLHFGCYCK 831
+ +NEAE++ G+K++A LEK+K LEKETGK SL+ WAEAA +D+K LQ +LHFG YC+
Sbjct: 253 IAKNEAEMSRGIKVVAQLEKVKLTLEKETGKAVSLNCWAEAAGIDEKVLQHDLHFGWYCR 312
Query: 830 DELLRSARSLIVYIARNYRGLGVGFEDLIQAGSIGVLQGAERFDHTRGCRFSTYIQYWIK 651
DELL+S RSL++Y++R YRGLGV EDL+QAG+IG+LQGAERFDHTRG +FSTY+QYWI+
Sbjct: 313 DELLKSGRSLVLYLSRYYRGLGVAHEDLMQAGNIGILQGAERFDHTRGYQFSTYVQYWIR 372
Query: 650 KSILMLVERNCRGVRIPYALSKTMKKIQKARKTLSNSLGTYPDDYEIAKSTGISLSKITS 471
K++ LV R+ RG+++P LS T+ ++QKARK L S G +PDD E++KSTG+SL KI S
Sbjct: 373 KAMSQLVSRHGRGIKVPTTLSTTINRVQKARKILKRSQGKHPDDVEVSKSTGLSLDKIKS 432
Query: 470 ASNSLRVIGSLDRKIGDFTNVKCLELMPDTSIKGPEETVTRQHLLKDMYNLLEELNPRER 291
A N LR++GSLD+K+G F N+K LE PDT+++ PE+TV +QH+ D++ LL+EL+P+ER
Sbjct: 433 ADNCLRIVGSLDQKVGHFINMKYLECTPDTALEMPEKTVMKQHMRNDVHKLLQELDPKER 492
Query: 290 QVLLLRLGLEDNHCMSLQEIGRLYSVSKEWIRKIERTALTKLRDQETLHSLNHYL 126
+VL+ R GLE HCMSL E+G+++ VSKEWIRK+E+ ALTKLR ++ +L HYL
Sbjct: 493 RVLIHRYGLE-GHCMSLHEVGKVFDVSKEWIRKMEKRALTKLRTEQNQTNLKHYL 546
Score = 93.6 bits (231), Expect = 2e-16
Identities = 58/140 (41%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
Frame = -3
Query: 1709 FKGMEASYDTARVSFPYIVLGETETMHNDHLRAHSCPSAAH-TLSNDYLETEHIIIRKST 1533
F+G E + +AR+S I E+ET+ D LR H+ S+ T+ NDY E I ++S
Sbjct: 33 FRGKELDFGSARLSLLTIGFDESETLRKDTLRPHAGSSSVPLTVENDYSNLETTISKRS- 91
Query: 1532 CADISCIINCNFRKPDEANQYTSATSVQASKVSHFGVLMNNLNMLEKTFAESDALRLEND 1353
C D+ I + + + Y SVQ+ SHF LM N+N+LE ++S+ L+LE D
Sbjct: 92 CKDL--ISDTEVLSDRDVSVYVR--SVQSCSASHFHTLMANINLLENKVSDSELLKLEKD 147
Query: 1352 ILSQLDRLGALKLFYSCLSR 1293
IL QL RLGAL+LF++CLSR
Sbjct: 148 ILVQLGRLGALQLFHACLSR 167
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 374 bits (959), Expect = e-101
Identities = 178/295 (60%), Positives = 233/295 (78%)
Frame = -3
Query: 1010 LTRNEAELTAGVKLLADLEKIKTLLEKETGKTASLSSWAEAAQVDKKTLQQNLHFGCYCK 831
+ RNEAE+ G+K+LADLEKI+T LE+ET + SLS WAEAA +D K LQQ L FG YC+
Sbjct: 264 IARNEAEMARGIKVLADLEKIRTTLEEETERVVSLSCWAEAAGLDVKVLQQQLSFGWYCR 323
Query: 830 DELLRSARSLIVYIARNYRGLGVGFEDLIQAGSIGVLQGAERFDHTRGCRFSTYIQYWIK 651
DEL++S RSL++Y ARNYRG G+ EDL+QAG++GVL+GAERFDHTRG RFSTY+QYWI+
Sbjct: 324 DELIKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVLEGAERFDHTRGYRFSTYVQYWIR 383
Query: 650 KSILMLVERNCRGVRIPYALSKTMKKIQKARKTLSNSLGTYPDDYEIAKSTGISLSKITS 471
KS+ +V R RG++IP LS+ + +IQKARK L+ S G YPDD EIAK TG+SL+KI S
Sbjct: 384 KSMSKIVSRLARGIQIPCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIES 443
Query: 470 ASNSLRVIGSLDRKIGDFTNVKCLELMPDTSIKGPEETVTRQHLLKDMYNLLEELNPRER 291
AS LRV+GS+D+KIG+ N K LE +PDTS++ PEE V RQH+++DM+NLL L+ RER
Sbjct: 444 ASRCLRVVGSIDQKIGESLNAKYLEFLPDTSVQSPEEVVMRQHMIQDMHNLLRSLDSRER 503
Query: 290 QVLLLRLGLEDNHCMSLQEIGRLYSVSKEWIRKIERTALTKLRDQETLHSLNHYL 126
QVL+LR GL D SL+EIGR + VSKEW+R++E+ +T+LR++ET +L HY+
Sbjct: 504 QVLILRFGLNDYQPKSLEEIGRHFHVSKEWVRRLEKRVMTRLRNEETCRNLRHYI 558
Score = 92.4 bits (228), Expect = 4e-16
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Frame = -3
Query: 1805 MGIGFRLNFRWASSVKYPYYXXXXXXXXXXXSFKGMEASYDTARVSFPYIVLGETETMHN 1626
MG GFRLN + P +G EA+ +R+SF ++ E + H
Sbjct: 1 MGFGFRLNLKLDFPFHSPNSPSRLSSSPSSSFVRGREATSYQSRLSFLSVISEEGDIAHR 60
Query: 1625 DHLRAHSCPSAAHTLSNDYLETEHIIIRKSTCADISCIINCNFRKPDEANQYTSATSVQA 1446
D L+ ++ A T+ N++ + E + + I + + + + S +S +
Sbjct: 61 DPLKTYAYSYAVQTVENEHSQGEGFKVNFGKRSHFGLNIIGDAEVSLKEDIFVSPSSTK- 119
Query: 1445 SKVSHFGVLMNNLNMLEKTFAESDALRLENDILSQLDRLGALKLFYSCLSRTRSP----P 1278
+ S F +L+ NLN+LE++FA+SDA +LE DIL QL +LGALKLF +CL+RT
Sbjct: 120 ERTSRFSLLLENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRTLETTNVLE 179
Query: 1277 VNSLVTEYIQEHQMK-SDVNDQMAKIV 1200
V+ + TE I E + + +N+Q+ +V
Sbjct: 180 VSDVHTEIIGECNINGTSINNQIKVVV 206