BLASTX nr result

ID: Angelica23_contig00000248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00000248
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. glo...   147   7e-34
ref|XP_002301370.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabi...   143   1e-32
ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis tha...   143   1e-32
ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [...   142   4e-32

>gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
          Length = 238

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = +3

Query: 3   ISYGMPTKQLSIKRLTCISPYSAAIALGSEMSGGIEDVRAEDITAINTESGVRIKTGVGR 182
           ISYGMPTKQL I+RLTCISPYSA IALGSEMSGGIEDVRAEDITAINTESG+RIKT +GR
Sbjct: 37  ISYGMPTKQLVIRRLTCISPYSAMIALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGR 96

Query: 183 GGYVKDIFVKGMNLHTMKWVF 245
           GGYVKDI+V+GM +HTMKW F
Sbjct: 97  GGYVKDIYVRGMKMHTMKWAF 117


>ref|XP_002301370.1| predicted protein [Populus trichocarpa] gi|222843096|gb|EEE80643.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = +3

Query: 3   ISYGMPTKQLSIKRLTCISPYSAAIALGSEMSGGIEDVRAEDITAINTESGVRIKTGVGR 182
           I++GMPTKQL I+RLTCISPYSA IALGSEMSGGIEDVRAEDITAI+TESGVRIKT VGR
Sbjct: 265 IAFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIEDVRAEDITAIHTESGVRIKTAVGR 324

Query: 183 GGYVKDIFVKGMNLHTMKWVF 245
           GGYVKDI+VK M +HTMKWVF
Sbjct: 325 GGYVKDIYVKRMTMHTMKWVF 345


>ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297322456|gb|EFH52877.1| glycoside hydrolase
           family 28 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 475

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/81 (86%), Positives = 75/81 (92%)
 Frame = +3

Query: 3   ISYGMPTKQLSIKRLTCISPYSAAIALGSEMSGGIEDVRAEDITAINTESGVRIKTGVGR 182
           IS+GMPTK L I+RLTCISPYSAAIALGSEMSGGIEDVRAEDITA  TESGVRIKT VGR
Sbjct: 267 ISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGR 326

Query: 183 GGYVKDIFVKGMNLHTMKWVF 245
           G +VK+I+VKGMNLHTMKWVF
Sbjct: 327 GAFVKNIYVKGMNLHTMKWVF 347


>ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
           gi|42572755|ref|NP_974473.1| polygalacturonase-like
           protein [Arabidopsis thaliana]
           gi|334186188|ref|NP_001190154.1| polygalacturonase-like
           protein [Arabidopsis thaliana]
           gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis
           thaliana] gi|332646690|gb|AEE80211.1|
           polygalacturonase-like protein [Arabidopsis thaliana]
           gi|332646691|gb|AEE80212.1| polygalacturonase-like
           protein [Arabidopsis thaliana]
           gi|332646692|gb|AEE80213.1| polygalacturonase-like
           protein [Arabidopsis thaliana]
          Length = 476

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/81 (86%), Positives = 75/81 (92%)
 Frame = +3

Query: 3   ISYGMPTKQLSIKRLTCISPYSAAIALGSEMSGGIEDVRAEDITAINTESGVRIKTGVGR 182
           IS+GMPTK L I+RLTCISPYSAAIALGSEMSGGIEDVRAEDITA  TESGVRIKT VGR
Sbjct: 267 ISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGR 326

Query: 183 GGYVKDIFVKGMNLHTMKWVF 245
           G +VK+I+VKGMNLHTMKWVF
Sbjct: 327 GAFVKNIYVKGMNLHTMKWVF 347


>ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
          Length = 479

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/81 (81%), Positives = 75/81 (92%)
 Frame = +3

Query: 3   ISYGMPTKQLSIKRLTCISPYSAAIALGSEMSGGIEDVRAEDITAINTESGVRIKTGVGR 182
           I+YGMPTKQL I+RLTCISPYSA IALGSEMSGGI+DVRAEDI AIN+ESG+RIKTG+GR
Sbjct: 273 IAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGR 332

Query: 183 GGYVKDIFVKGMNLHTMKWVF 245
           GGYVKDI+V+GM + TMKW F
Sbjct: 333 GGYVKDIYVRGMTMKTMKWAF 353


Top