BLASTX nr result

ID: Angelica23_contig00000143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00000143
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...   259   1e-66
gb|ABA46782.1| unknown [Solanum tuberosum]                            249   6e-64
gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN398...   247   4e-63
ref|XP_002513523.1| polyadenylate-binding protein, putative [Ric...   245   1e-62
ref|XP_002299789.1| predicted protein [Populus trichocarpa] gi|1...   243   6e-62

>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  259 bits (661), Expect = 1e-66
 Identities = 130/181 (71%), Positives = 150/181 (82%), Gaps = 12/181 (6%)
 Frame = -1

Query: 888 MADLEVEAVNFEPEEDDLMDEDNAADIDNS---APIPRLKSAITGSA--------MRTKG 742
           MA  +VEAV+FEPE+DDLMDED A D+DNS   AP+P+LKSAITG A         +TKG
Sbjct: 1   MASADVEAVDFEPEDDDLMDEDGAVDVDNSSPRAPLPKLKSAITGGAPSSLAAAPKKTKG 60

Query: 741 RGFRTETDEERSIRMSGR-FDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLHNAFGG 565
           RGFR +TD +R+ R + R FDSLDSDGGPGP+RSIEGWIILVTGVHEEAQEDDL NAFG 
Sbjct: 61  RGFRDDTDADRNSRFAARDFDSLDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGE 120

Query: 564 YGQIKNLHLNLDRRTGFVKGYALIEYETFEDAQKAIAEMDGGELLTQTIAVDWAFSKGPY 385
           +G++KNLHLNLDRRTGFVKGYALIEYE  E+AQ AI+ M+G ELLTQTI+VDWAFS GP+
Sbjct: 121 FGEVKNLHLNLDRRTGFVKGYALIEYENLEEAQAAISAMNGTELLTQTISVDWAFSNGPF 180

Query: 384 K 382
           K
Sbjct: 181 K 181


>gb|ABA46782.1| unknown [Solanum tuberosum]
          Length = 195

 Score =  249 bits (637), Expect = 6e-64
 Identities = 126/174 (72%), Positives = 144/174 (82%), Gaps = 5/174 (2%)
 Frame = -1

Query: 888 MADLEVEAVNFEPEEDDLMDEDNAADIDNSAPIPRLKSAITGSAM----RTKGRGFRTET 721
           MA+ EVEAV+FEPEEDDLMDED  A     A IP+LKSAITG +     +TKGRGFR E 
Sbjct: 1   MANAEVEAVDFEPEEDDLMDEDVDASSSPRATIPKLKSAITGGSSSAPKKTKGRGFREEA 60

Query: 720 DE-ERSIRMSGRFDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLHNAFGGYGQIKNL 544
            E +R+ RMS RFDSLDS+GGPGPERSIEGWI+LVTGV+EE QEDDLHN FG +G+IKNL
Sbjct: 61  AEADRNARMSARFDSLDSEGGPGPERSIEGWIVLVTGVNEETQEDDLHNDFGEFGEIKNL 120

Query: 543 HLNLDRRTGFVKGYALIEYETFEDAQKAIAEMDGGELLTQTIAVDWAFSKGPYK 382
           HLNLDRRTGFVKGYA IEYE+FE+AQ+AI+E DG E LTQTI V WAFS+GP+K
Sbjct: 121 HLNLDRRTGFVKGYAFIEYESFEEAQRAISEKDGAEFLTQTIHVAWAFSRGPFK 174


>gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN39899.1| unknown
           [Picea sitchensis]
          Length = 205

 Score =  247 bits (630), Expect = 4e-63
 Identities = 125/182 (68%), Positives = 144/182 (79%), Gaps = 13/182 (7%)
 Frame = -1

Query: 888 MADLEVEAVNFEPEEDDLMDEDNAADIDNS----APIPRLKSAITGSAM--------RTK 745
           MA  EV+AV+FEPEEDDLMD+D A D  N+     P P+LKS ITG           +TK
Sbjct: 1   MAGAEVDAVDFEPEEDDLMDDDTAMDDGNADAVPTPAPKLKSTITGGTSQLGDGGPKKTK 60

Query: 744 GRGFRTETDEERSIRMSGR-FDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLHNAFG 568
           GRGFR ETD ER+ R + R F+SLDSDGGPGP+RSIEGWIILVTGVHEEAQEDDLH  FG
Sbjct: 61  GRGFREETDAERNSRFAAREFESLDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLHELFG 120

Query: 567 GYGQIKNLHLNLDRRTGFVKGYALIEYETFEDAQKAIAEMDGGELLTQTIAVDWAFSKGP 388
            +G+IKNLHLNLDRRTGFVKGYALIEYETF++AQ AI  ++G ELLTQTI+VDWAFS GP
Sbjct: 121 EFGEIKNLHLNLDRRTGFVKGYALIEYETFKEAQAAITNLNGAELLTQTISVDWAFSNGP 180

Query: 387 YK 382
           ++
Sbjct: 181 FR 182


>ref|XP_002513523.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223547431|gb|EEF48926.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  245 bits (626), Expect = 1e-62
 Identities = 126/180 (70%), Positives = 142/180 (78%), Gaps = 11/180 (6%)
 Frame = -1

Query: 888 MADLEVEAVNFEPEEDDLMDEDNAADIDNS--APIPRLKSAITGSAM-------RTKGRG 736
           MA+ + EAV+FEPEEDDLMDED   D D S  AP+P+LKSAITG A        +TKGRG
Sbjct: 1   MANADAEAVDFEPEEDDLMDEDGGVDADASPRAPLPKLKSAITGGAASSLSAPRKTKGRG 60

Query: 735 FRTETDEERSIRMSGR--FDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLHNAFGGY 562
           FR E D +R  R++ R  FDSL +DGGPGP+RSIEGWIILVTGVHEEAQEDDL NAFG +
Sbjct: 61  FREEADADRQTRLASRGDFDSLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDF 120

Query: 561 GQIKNLHLNLDRRTGFVKGYALIEYETFEDAQKAIAEMDGGELLTQTIAVDWAFSKGPYK 382
           G+IKNLHLNLDRRTGFVKGYALIEYE FE+AQ AIA ++G ELLTQ I VDWAF  GP K
Sbjct: 121 GEIKNLHLNLDRRTGFVKGYALIEYEKFEEAQNAIASLNGTELLTQIINVDWAFCNGPTK 180


>ref|XP_002299789.1| predicted protein [Populus trichocarpa] gi|118484267|gb|ABK94013.1|
           unknown [Populus trichocarpa]
           gi|222847047|gb|EEE84594.1| predicted protein [Populus
           trichocarpa]
          Length = 205

 Score =  243 bits (620), Expect = 6e-62
 Identities = 126/180 (70%), Positives = 141/180 (78%), Gaps = 13/180 (7%)
 Frame = -1

Query: 888 MADLEVEAVNFEPEEDDLMDEDNAADIDNS----APIPRLKSAITGSAM--------RTK 745
           MA+ E EAV+FEPEEDDLMDED AAD D S    AP+P+LKSAITG +         +TK
Sbjct: 1   MANTEAEAVDFEPEEDDLMDEDGAADADASSSPRAPLPKLKSAITGGSASSSLSAPKKTK 60

Query: 744 GRGFRTETDEERSIRMSGR-FDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLHNAFG 568
           GRGFR E D ER  R+SGR FDSL SDGGPGP+RS+EGWIILV+GVHEEAQ+D L  AFG
Sbjct: 61  GRGFREEVDAERQSRLSGRGFDSLGSDGGPGPQRSVEGWIILVSGVHEEAQDDHLQEAFG 120

Query: 567 GYGQIKNLHLNLDRRTGFVKGYALIEYETFEDAQKAIAEMDGGELLTQTIAVDWAFSKGP 388
            +G+IKNLHLNLDRRTGFVKGYALIEYE FE A+ AIA M+GG LL Q I VDWAFS GP
Sbjct: 121 EFGEIKNLHLNLDRRTGFVKGYALIEYEKFEQAENAIASMNGGTLLEQIIYVDWAFSNGP 180


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