BLASTX nr result
ID: Angelica23_contig00000069
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00000069
(5780 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 655 0.0
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 654 0.0
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 620 e-174
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 611 e-172
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 610 e-171
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 655 bits (1690), Expect = 0.0
Identities = 407/1178 (34%), Positives = 612/1178 (51%), Gaps = 31/1178 (2%)
Frame = +3
Query: 2055 YNIRGLN--GKQTFVKDFLCHNKVSFISLLETHVQKEQAVNISRFLSPSLSWDFNYEYHN 2228
+N+RGLN K + +K ++ N F L+ET V++ + + L S NYE++
Sbjct: 6 WNVRGLNKSSKHSVIKKWIEENNFQFGCLVETRVKESKVSQLVGKLFKDWSILTNYEHNR 65
Query: 2229 NGRIWVGWDSNIWRVVPIAKSAQQISCQVSKLDTGEAFVVSFVYGFNTYQDRRALWEELK 2408
GRIWV W N+ R+ PI KS Q ++C V D + F SFVY N ++R+ LW ELK
Sbjct: 66 RGRIWVLWRKNV-RLSPIYKSCQLLTCSVKLEDRQDEFFCSFVYASNYVEERKVLWSELK 124
Query: 2409 TVSDS-IGDNMAWCLTGDFNVTLGPAETNNLEVW---SSGMLEFKAFISEVGITDLRSSG 2576
DS I + W L GDFN TL AE + V + GM +F+ I+ +TD+ + G
Sbjct: 125 DHYDSPIIRHKPWTLLGDFNETLDIAEHSQSFVHPMVTPGMRDFQQVINYCSLTDMAAQG 184
Query: 2577 PSFTWWDSSIHNPILKKLDRCMVNGHWLALFPLSQVHILPRGISDHCPVATTLGMR---K 2747
P FTW + H I+KKLDR ++N W F S G SDH +L K
Sbjct: 185 PLFTWCNKREHGLIMKKLDRVLINDCWNQTFSQSYSVFEAGGCSDHLRCRISLNSEAGNK 244
Query: 2748 EKVRKPFQFFNHLLQVPEFLEVVREAW-GTEMV----GDPWFSXXXXXXXXXXXXXXXND 2912
+ KPF+F N L + +F +V W TE + + D
Sbjct: 245 VQGLKPFKFVNALTDMEDFKPMVSTYWKDTEPLILSTSTLFRFSKNLKGLKPKIRSMARD 304
Query: 2913 QGGNLHLKVKAARNDLQNFQSLMPSIPNAGNFREEASLIDKLQQALLEEETFLKQKSRIQ 3092
+ GNL K A L Q + + P++ EE + + + + EE +LKQKS++
Sbjct: 305 RLGNLSKKANEAYKILCAKQHVNLTNPSSMAMEEENAAYSRWDRVAILEEKYLKQKSKLH 364
Query: 3093 WLNKGDNNNKYFYNSCKGRWNVNKILSIVDDNGEVHTSHSSISSAAVKHFENLLG----- 3257
W GD N K F+ + R N I I+ ++G V T I + A + F L
Sbjct: 365 WCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAERFFREFLQLIPND 424
Query: 3258 -SPSTMADIPTDLDIPQLSEDQRNLLNEDFTEDDVLNTFKHMAKNKCPGPDGFSVEFYLA 3434
T+ ++ L + DQ++L+ T +++ M +K PGPDG++ EF+ A
Sbjct: 425 FEGVTITELQQLLPVRCSDADQQSLIRP-VTAEEIRKVLFRMPSDKSPGPDGYTSEFFKA 483
Query: 3435 TWTIVGSDVMKGILHFFRTLHLPRIVNSSAIALIPKSNSATTMNDFRPISCCNVLYKCIS 3614
TW I+G + + FF LP+ +NS+ +ALIPK A M D+RPISCCNVLYK IS
Sbjct: 484 TWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVIS 543
Query: 3615 KMLSARLRLVLPYLISPCQSAFVPQRNIGDNIMLAQALCKGYHLSSGLPRCAIKLDIKKA 3794
K+++ RL+LVLP I+ QSAFV R + +N++LA L K YH + RCAIK+DI KA
Sbjct: 544 KIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKA 603
Query: 3795 FDSLNWSFLFSALQRMGFPDKFIAWVSTCIHTSMLSVKINGAIEGYFKAGSGLRQGDPMS 3974
FDS+ W FL + +GFP +FI W++ CI T+ SV++NG + GYF++ GLRQG +S
Sbjct: 604 FDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALS 663
Query: 3975 PYLFVIAMEVLTACLKKGTDSVGFKYHGLTENM-ISHLIFADDVFLFCNGDLTSISLLLE 4151
PYLFVI M+VL+ L K + F YH + M ++HL FADD+ + +G + SI +++
Sbjct: 664 PYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIK 723
Query: 4152 SVNLFSSISGLMPNASKSQCFFGNVDDAIIDWTLRSTGFQQGILPIKYLGLPLISTKLTA 4331
+ F+ SGL + KS + + + F G LP++YLGLPLI+ +L+
Sbjct: 724 VFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLST 783
Query: 4332 RDCLPLILRITSKIETWTCKFLSLAGRLLLLKTVLQGIQGYWSAYLFLQKGILRKLQSLF 4511
DCLPL+ ++ +I +WT +FLS AGRL L+ +VL I +W A L + +R+L+ +
Sbjct: 784 TDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMC 843
Query: 4512 SRFLWTGSTVVKGCAKVAWVECCYPKAEGGLGLRDLLDWNKAAIFFQLWRILHSNSQSIW 4691
S FLW+G+ + AK++W C PK EGGLGLR L + N +W+I+ S+S S+W
Sbjct: 844 SAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIV-SHSNSLW 902
Query: 4692 ISWVREKIIGSKPFWTMTIPYN-GSWSLKKIFKAREEALSFIQYNVGVNSEFLFWHDPWS 4868
+ WV + ++ + FW + + GSW KK+ K RE A + + VG + FW+D WS
Sbjct: 903 VKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNWS 962
Query: 4869 NGMPLAQRFGNE-IISMCDSMKLDPVHTFIHNGQWRLPISNHEKVMELRCLVSSVHIHRN 5045
+ L +R G+ +I + S ++ + + Q R + + +
Sbjct: 963 DLGQLLERTGDRGLIDLGISRRMTVEEAWTNRRQRRHRNDVYNVIEDALKKSWDTRTETE 1022
Query: 5046 DLISWHG-TDCKDVSIAT--IWNSLRRVNASPPWLKAVWHSFSIPKCSLFLWLALQNRIL 5216
D + W G +D + +T W+ R +A PW K +W S + PK S WLA R+
Sbjct: 1023 DKVLWRGKSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLP 1082
Query: 5217 TKDRMLRFNMVVDPNCVLCNTGQLETVEHLFEQCPYTQSIF---QRAGFPLRCS--WSNY 5381
T DRM+ + + +C+ C G LET +HLF C +T I+ R F + + W +
Sbjct: 1083 TGDRMINWANGIATDCIFCQ-GTLETRDHLFFTCSFTSVIWVDLARGIFKTQYTSHWQS- 1140
Query: 5382 LLGDFMVGQVTNVQELLGYLYLSVAGHSIWRERNDRIH 5495
++ Q V+ L + +WRERN R H
Sbjct: 1141 IIEAITNSQHHRVEWFLRRYVFQATIYIVWRERNGRRH 1178
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 654 bits (1686), Expect = 0.0
Identities = 407/1190 (34%), Positives = 618/1190 (51%), Gaps = 28/1190 (2%)
Frame = +3
Query: 2034 MSIDFLSYNIRGLNG--KQTFVKDFLCHNKVSFISLLETHVQKEQAVNISRFLSPSLSWD 2207
M + +NIRG N ++ K ++ NK F ++ETHV++ + L P S+
Sbjct: 1 MCTNLFCWNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINALLPGWSFV 60
Query: 2208 FNYEYHNNGRIWVGWDSNIWRVVPIAKSAQQISCQVSKLDTGEAFVVSFVYGFNTYQDRR 2387
NY + + G+IWV WD ++ +VV +AKS Q I+C+V + +VS VY N R+
Sbjct: 61 ENYAFSDLGKIWVMWDPSV-QVVVVAKSLQMITCEVLLPGSPSWIIVSVVYAANEVASRK 119
Query: 2388 ALWEEL--KTVSDSIGDNMAWCLTGDFNVTLGPAETNN---LEVWSSGMLEFKAFISEVG 2552
LW E+ VS IGD W + GDFN L P E +N L V M +F+ +
Sbjct: 120 ELWIEIVNMVVSGIIGDR-PWLVLGDFNQVLNPQEHSNPVSLNV-DINMRDFRDCLLAAE 177
Query: 2553 ITDLRSSGPSFTWWDSSIHNPILKKLDRCMVNGHWLALFPLSQVHILPRGISDHCPVATT 2732
++DLR G +FTWW+ S P+ KK+DR +VN W ALFP S SDH
Sbjct: 178 LSDLRYKGNTFTWWNKSHTTPVAKKIDRILVNDSWNALFPSSLGIFGSLDFSDHVSCGVV 237
Query: 2733 LGMRKEKVRKPFQFFNHLLQVPEFLEVVREAWGT-EMVGDPWFSXXXXXXXXXXXXXXXN 2909
L K ++PF+FFN+LL+ +FL +VR+ W T +VG F +
Sbjct: 238 LEETSIKAKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFS 297
Query: 2910 DQG-GNLHLKVKAARNDLQNFQSLMPSIPNAGNFREEASLIDKLQQALLEEETFLKQKSR 3086
L + K A + L Q + P N E K EE+F +QKSR
Sbjct: 298 RLNYSELEKRTKEAHDFLIGCQDRTLADPTPINASFELEAERKWHILTAAEESFFRQKSR 357
Query: 3087 IQWLNKGDNNNKYFYNSCKGRWNVNKILSIVDDNGEVHTSHSSISSAAVKHFENLLGS-- 3260
I W +GD N KYF+ R + N I ++ D NG++ S I +F +LLG
Sbjct: 358 ISWFAEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLLGDEV 417
Query: 3261 -PSTMADIPTDLDIP-QLSEDQRNLLNEDFTEDDVLNTFKHMAKNKCPGPDGFSVEFYLA 3434
P M +L + + S Q L F+ +D+ + +NK GPDGF+ EF++
Sbjct: 418 DPYLMEQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFID 477
Query: 3435 TWTIVGSDVMKGILHFFRTLHLPRIVNSSAIALIPKSNSATTMNDFRPISCCNVLYKCIS 3614
+W+IVG++V I FF + L + N++ I LIPK + T +DFRPISC N LYK I+
Sbjct: 478 SWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIA 537
Query: 3615 KMLSARLRLVLPYLISPCQSAFVPQRNIGDNIMLAQALCKGYHLSSGLPRCAIKLDIKKA 3794
++L+ RL+ +L +IS QSAF+P R++ +N++LA L GY+ S+ PR +K+D+KKA
Sbjct: 538 RLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKA 597
Query: 3795 FDSLNWSFLFSALQRMGFPDKFIAWVSTCIHTSMLSVKINGAIEGYFKAGSGLRQGDPMS 3974
FDS+ W F+ +AL+ + P+KFI W+S CI T +V ING G+FK+ GLRQGDP+S
Sbjct: 598 FDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLS 657
Query: 3975 PYLFVIAMEVLTACLKKGTDSVGFKYHGLTENM-ISHLIFADDVFLFCNGDLTSISLLLE 4151
PYLFV+AME + L +S YH N+ ISHL+FADDV +F +G S+ + E
Sbjct: 658 PYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICE 717
Query: 4152 SVNLFSSISGLMPNASKSQCFFGNVDDAIIDWTLRSTGFQQGILPIKYLGLPLISTKLTA 4331
+++ F+S SGL N KS + ++ + + GF G LPI+YLGLPL++ KL
Sbjct: 718 TLDDFASWSGLKVNKDKSHLYLAGLNQ-LESNANAAYGFPIGTLPIRYLGLPLMNRKLRI 776
Query: 4332 RDCLPLILRITSKIETWTCKFLSLAGRLLLLKTVLQGIQGYWSAYLFLQKGILRKLQSLF 4511
+ PL+ +IT++ +W K LS AGR+ L+ +V+ G +W + L KG +++++SL
Sbjct: 777 AEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLC 836
Query: 4512 SRFLWTGSTVVKGCAKVAWVECCYPKAEGGLGLRDLLDWNKAAIFFQLWRILHSNSQSIW 4691
SRFLW+G+ KV+W C PK+EGGLGLR LL+WNK +WR+ + S+W
Sbjct: 837 SRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVA-KDSLW 895
Query: 4692 ISWVREKIIGSKPFWTMTIPYNGSWSLKKIFKAREEALSFIQYNVGVNSEFLFWHDPWSN 4871
W + FW + + SW+ K++ R A F+ VG + +W+D W++
Sbjct: 896 ADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADYWYDNWTS 955
Query: 4872 GMPLAQRFGNEIISMCDSMKLDPVHTFIHNGQWRLPISNHEKVMELRCLVSSVHIHRN-- 5045
PL + G+ S L V + WRLP+S + + +V +
Sbjct: 956 LGPLFRIIGDIGPSSLRVPLLAKVASAFSEDGWRLPVSRSAPAKGIHDHLCTVPVPSTAQ 1015
Query: 5046 ---DLISW--HGTDCKDVSIATIWNSLRRVNASPPWLKAVWHSFSIPKCSLFLWLALQNR 5210
D W +G C+ S A W ++R W ++W ++PK + +W++ NR
Sbjct: 1016 EDVDRYEWSVNGFLCQGFSAAKTWEAIRPKATVKSWASSIWFKGAVPKYAFNMWVSHLNR 1075
Query: 5211 ILTKDRMLRFNMVVDPNCVLCNTGQLETVEHLFEQCPYTQSIFQRAGFPLRC-------S 5369
+LT+ R+ + + CVLC+ E+ +HL C ++ ++ R F C S
Sbjct: 1076 LLTRQRLASWGHIQSDACVLCSFAS-ESRDHLLLICEFSAQVW-RLVFRRICPRQRLFSS 1133
Query: 5370 WSNYLLGDFMVGQVTNVQELLGYLYLSVAGHSIWRERNDRIHKPGHCIPA 5519
WS L ++ LL + V +++WR+RN+ +H PA
Sbjct: 1134 WSELL--SWVRQSSPEAPPLLRKIVSQVVVYNLWRQRNNLLHNSLRLAPA 1181
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 620 bits (1600), Expect = e-174
Identities = 395/1212 (32%), Positives = 603/1212 (49%), Gaps = 30/1212 (2%)
Frame = +3
Query: 2040 IDFLSYNIRGLNG---KQTFVKDFLCHNKVSFISLLETHVQKEQAVNISRFLSPSLSWDF 2210
ID S+N+RG N ++ F K F +K F S+LET V++ +A P
Sbjct: 2 IDTFSWNVRGFNNSVRRRNFRKWFKL-SKALFGSILETRVKEHRARRSLLSSFPGWKSVC 60
Query: 2211 NYEYHNNGRIWVGWDSNIWRVVPIAKSAQQISCQVSKLDTGEAFVVSFVYGFNTYQDRRA 2390
NYE+ GRIWV WD + V ++KS Q ISC V FVV+FVY N RR
Sbjct: 61 NYEFAALGRIWVVWDPAV-EVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRR 119
Query: 2391 LWEELKTVS-DSIGDNMAWCLTGDFNVTLGP--AETNNLEVWSSGMLEFKAFISEVGITD 2561
LW EL+ ++ + + W + GDFN +L P A T + + GM EF+ + I+D
Sbjct: 120 LWSELELLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRI-TRGMEEFRECLLTSNISD 178
Query: 2562 LRSSGPSFTWWDSSIHNPILKKLDRCMVNGHWLALFPLSQVHILPRGISDHCPVATTLGM 2741
L G +TWW++ +NPI KK+DR +VN WL PLS SDHCP +
Sbjct: 179 LPFRGNHYTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISN 238
Query: 2742 RKEKVRKPFQFFNHLLQVPEFLEVVREAWGT-EMVGDPWFSXXXXXXXXXXXXXXXN-DQ 2915
+ KPF+ N L+ PEF+E +R W G F+ N +
Sbjct: 239 QSGGRNKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREH 298
Query: 2916 GGNLHLKVKAARNDLQNFQSLMPSIPNAGNFREEASLIDKLQQALLEEETFLKQKSRIQW 3095
L +V A +L+ Q+ + + P++ E + L EE FL QKSR+ W
Sbjct: 299 YSGLEKRVVQAAQNLKTCQNNLLAAPSSYLAGLEKEAHRSWAELALAEERFLCQKSRVLW 358
Query: 3096 LNKGDNNNKYFYNSCKGRWNVNKILSIVDDNGEVHTSHSSISSAAVKHFENLLGSPSTMA 3275
L GD+N +F+ R +N+I ++D G + + + V F+ L GS S +
Sbjct: 359 LKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLI 418
Query: 3276 DIPTDLDIPQLS-----EDQRNLLNEDFTEDDVLNTFKHMAKNKCPGPDGFSVEFYLATW 3440
I L+ E+ R LL + +E D+ + F + NK PGPDG++ EF+ TW
Sbjct: 419 SAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTW 478
Query: 3441 TIVGSDVMKGILHFFRTLHLPRIVNSSAIALIPKSNSATTMNDFRPISCCNVLYKCISKM 3620
+IVG ++ + FFR+ L NS+A+ ++PK +A + +FRPISCCN +YK ISK+
Sbjct: 479 SIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKL 538
Query: 3621 LSARLRLVLPYLISPCQSAFVPQRNIGDNIMLAQALCKGYHLSSGLPRCAIKLDIKKAFD 3800
L+ RL +LP ISP QSAFV R + +N++LA L +G+ ++ R +K+D++KAFD
Sbjct: 539 LARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFD 598
Query: 3801 SLNWSFLFSALQRMGFPDKFIAWVSTCIHTSMLSVKINGAIEGYFKAGSGLRQGDPMSPY 3980
S+ W F+ L+ P +F+ W+ CI ++ S+ ++G++ GYFK GLRQGDP+SP
Sbjct: 599 SVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPS 658
Query: 3981 LFVIAMEVLTACLKKGTDSVGFKYH-GLTENMISHLIFADDVFLFCNGDLTSISLLLESV 4157
LFVIAME+L+ L+ YH +E IS L FADD+ +F +G +S+ + +
Sbjct: 659 LFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVL 718
Query: 4158 NLFSSISGLMPNASKSQCFFGNVDDAIIDWTLRSTGFQQGILPIKYLGLPLISTKLTARD 4337
F ++SGL N KS + ++D + TL + GF G P +YLGLPL+ KL D
Sbjct: 719 ESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTL-AFGFVNGTFPFRYLGLPLLHRKLRRSD 777
Query: 4338 CLPLILRITSKIETWTCKFLSLAGRLLLLKTVLQGIQGYWSAYLFLQKGILRKLQSLFSR 4517
LI +I ++ W K LS AGRL L+ +V+ +W + L K L+ ++ + +R
Sbjct: 778 YSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNR 837
Query: 4518 FLWTGSTVVKGCAKVAWVECCYPKAEGGLGLRDLLDWNKAAIFFQLWRILHSNSQSIWIS 4697
FLW +G KV+W C PKAEGGLGLR+ WNK +W +L + S+W++
Sbjct: 838 FLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIW-MLFARRDSLWVA 896
Query: 4698 WVREKIIGSKPFWTMTIPYNGSWSLKKIFKAREEALSFIQYNVGVNSEFLFWHDPWSNGM 4877
W + FW + SW K I R A F++ VG +W+D WSN
Sbjct: 897 WNHANRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYWYDHWSNLG 956
Query: 4878 PLAQRFGNEIISMCDSMKLDPVHTFIHNGQWRLPI--SNHEKVMELRCLVSSVHI----H 5039
PL + G + + V + W LP + + + LR + +
Sbjct: 957 PLIEAIGASGPQLTGIHESAVVTEASSSTGWILPSARTRNASLANLRSTLLNSPAPSGDR 1016
Query: 5040 RNDLISWH--GTDCKDVSIATIWNSLRRVNASPPWLKAVWHSFSIPKCSLFLWLALQNRI 5213
D +W+ G+ S W LR+ + + W AVW+ IPK + W+A NR+
Sbjct: 1017 GEDTYTWYIEGSSSTSFSSKLTWECLRQRDTTKLWAAAVWYKGCIPKYAFNFWVAHLNRL 1076
Query: 5214 LTKDRMLRFNMVVDPNCVLCNTGQLETVEHLFEQCPYTQSIFQR--AGF---PLRCSWSN 5378
+ R ++ C +C + ET +HLF C I+Q+ A F + W +
Sbjct: 1077 PVRARTTHWSTNRPSLCCVCQR-ETETRDHLFIHCTLGSLIWQQVLARFGRSQMFREWKD 1135
Query: 5379 YLLGDFMVGQVTNVQELLGYLYLSVAGHSIWRERNDRIH---KPGHCIPAWRITKQVKEM 5549
+ ++M+ + L L + A IW+ERN R+H H +I + +++
Sbjct: 1136 II--EWMLSNQGSFSGTLKKLAVQTAIFHIWKERNSRLHSAMSASHTAIFKQIDRSIRDS 1193
Query: 5550 MRAKVFTCKKFK 5585
+ A++ T + FK
Sbjct: 1194 ILARI-TRRNFK 1204
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 611 bits (1576), Expect = e-172
Identities = 361/1040 (34%), Positives = 550/1040 (52%), Gaps = 24/1040 (2%)
Frame = +3
Query: 2448 LTGDFNVTLGPAETNN---LEVWSSGMLEFKAFISEVGITDLRSSGPSFTWWDSSIHNPI 2618
+ GDFN L P E +N L + M +F + +SE+ ++DL G SFTWW+ S PI
Sbjct: 1 MLGDFNQVLLPQEHSNPPSLNI-DRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPI 59
Query: 2619 LKKLDRCMVNGHWLALFPLSQVHILPRGISDHCPVATTLGMRKEKVRKPFQFFNHLLQVP 2798
KKLDR + N W L+P S SDH L ++PF+FFN LL+
Sbjct: 60 AKKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNE 119
Query: 2799 EFLEVVREAW-GTEMVGDPWFSXXXXXXXXXXXXXXXNDQG-GNLHLKVKAARNDLQNFQ 2972
+FL VV + W T +VG + + + L+ K A L Q
Sbjct: 120 DFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQ 179
Query: 2973 SLMPSIPNAGNFREEASLIDKLQQALLEEETFLKQKSRIQWLNKGDNNNKYFYNSCKGRW 3152
+L + P+ N E K EE+F Q+SR+ W +GD+N YF+ R
Sbjct: 180 NLTLANPSVSNAALELEAQRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRK 239
Query: 3153 NVNKILSIVDDNGEVHTSHSSISSAAVKHFENLLGS---PSTMADIPTDLDIP-QLSEDQ 3320
+ N I S+VD NG + S I V ++E LLGS P +M +L + + S+DQ
Sbjct: 240 SFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCSQDQ 299
Query: 3321 RNLLNEDFTEDDVLNTFKHMAKNKCPGPDGFSVEFYLATWTIVGSDVMKGILHFFRTLHL 3500
+ L + FT+D++ FK + +NK GPDG+SVEF+ TW+I+G +V+ I FF + L
Sbjct: 300 CSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQL 359
Query: 3501 PRIVNSSAIALIPKSNSATTMNDFRPISCCNVLYKCISKMLSARLRLVLPYLISPCQSAF 3680
+ N++ + LIPK+++A T+++FRPISC N LYK ISK+L++RL+ +L +I QSAF
Sbjct: 360 LKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAF 419
Query: 3681 VPQRNIGDNIMLAQALCKGYHLSSGLPRCAIKLDIKKAFDSLNWSFLFSALQRMGFPDKF 3860
+P R++ +N++LA + GY+ + PR +K+D+KKAFDS+ W F+ +AL+ + P+++
Sbjct: 420 LPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERY 479
Query: 3861 IAWVSTCIHTSMLSVKINGAIEGYFKAGSGLRQGDPMSPYLFVIAMEVLTACLKKGTDSV 4040
I W+ CI T ++ +NGA G+F++ GLRQGDP+SPYLFV+AMEV + L DS
Sbjct: 480 INWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSG 539
Query: 4041 GFKYHGLTENM-ISHLIFADDVFLFCNGDLTSISLLLESVNLFSSISGLMPNASKSQCFF 4217
YH ++ ISHL+FADDV +F +G +S+ + E+++ F+ SGL N KSQ F
Sbjct: 540 YIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQ 599
Query: 4218 GNVD--DAIIDWTLRSTGFQQGILPIKYLGLPLISTKLTARDCLPLILRITSKIETWTCK 4391
+D + I T + GF G PI+YLGLPL+ KL D PL+ ++++++ +W K
Sbjct: 600 AGLDLSERI---TSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSK 656
Query: 4392 FLSLAGRLLLLKTVLQGIQGYWSAYLFLQKGILRKLQSLFSRFLWTGSTVVKGCAKVAWV 4571
LS AGR L+ +V+ G+ +W + L KG ++K++SL S+FLW GS + +KV+WV
Sbjct: 657 ALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWV 716
Query: 4572 ECCYPKAEGGLGLRDLLDWNKAAIFFQLWRILHSNSQSIWISWVREKIIGSKPFWTMTIP 4751
+CC PK+EGGLG R +WNK + +W +L S+W W R +G FW +
Sbjct: 717 DCCLPKSEGGLGFRSFGEWNKTLLLRLIW-VLFDRDTSLWAQWQRHHRLGHASFWQVNAL 775
Query: 4752 YNGSWSLKKIFKAREEALSFIQYNVGVNSEFLFWHDPWSNGMPLAQRFGNEIISMCDSMK 4931
W+ K + R A FI+ VG FW D W++ PL + G+
Sbjct: 776 QTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLIKYLGDVGSRPLRIPF 835
Query: 4932 LDPVHTFIHNGQWRLPISN----HEKVMELRCLVSSVHIHRNDLISW--HGTDCKDVSIA 5093
V I WRLP+S + L L + +D SW DC+ S A
Sbjct: 836 SAKVADAIDGSGWRLPLSRSLTADSILSHLASLPPPSPLMVSDSYSWCVDDVDCQGFSAA 895
Query: 5094 TIWNSLRRVNASPPWLKAVWHSFSIPKCSLFLWLALQNRILTKDRMLRFNMVVDPNCVLC 5273
W LR W K+VW ++PK + W A NR+ T+ R++ + +V C LC
Sbjct: 896 KTWEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLC 955
Query: 5274 NTGQLETVEHLFEQCPYTQSIFQRAGF------PLRCSWSNYLLGDFMVGQVTNVQELLG 5435
+ ET +HL C ++ +++ L C+W+ L + LL
Sbjct: 956 SF-DTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELL--SWTRQSTAAAPSLLR 1012
Query: 5436 YLYLSVAGHSIWRERNDRIH 5495
+ + +++WR+RN +H
Sbjct: 1013 KVVAQLVVYNLWRQRNLVLH 1032
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 610 bits (1573), Expect = e-171
Identities = 360/1040 (34%), Positives = 550/1040 (52%), Gaps = 24/1040 (2%)
Frame = +3
Query: 2448 LTGDFNVTLGPAETNN---LEVWSSGMLEFKAFISEVGITDLRSSGPSFTWWDSSIHNPI 2618
+ GDFN L P E +N L + M +F + +SE+ ++DL G SFTWW+ S PI
Sbjct: 1 MLGDFNQVLLPQEHSNPPSLNI-DRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPI 59
Query: 2619 LKKLDRCMVNGHWLALFPLSQVHILPRGISDHCPVATTLGMRKEKVRKPFQFFNHLLQVP 2798
KKLDR + N W L+P S SDH L ++PF+FFN LL+
Sbjct: 60 AKKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNE 119
Query: 2799 EFLEVVREAW-GTEMVGDPWFSXXXXXXXXXXXXXXXNDQG-GNLHLKVKAARNDLQNFQ 2972
+FL VV + W T +VG + + + L+ K A L Q
Sbjct: 120 DFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQ 179
Query: 2973 SLMPSIPNAGNFREEASLIDKLQQALLEEETFLKQKSRIQWLNKGDNNNKYFYNSCKGRW 3152
+L + P+ N E K EE+F Q+SR+ W +GD+N YF+ R
Sbjct: 180 NLTLANPSVSNAALELEAQRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRK 239
Query: 3153 NVNKILSIVDDNGEVHTSHSSISSAAVKHFENLLGS---PSTMADIPTDLDIP-QLSEDQ 3320
+ N I S+VD NG + S I V ++E LLGS P +M +L + + S+DQ
Sbjct: 240 SFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCSQDQ 299
Query: 3321 RNLLNEDFTEDDVLNTFKHMAKNKCPGPDGFSVEFYLATWTIVGSDVMKGILHFFRTLHL 3500
+ L + FT+D++ FK + +NK GPDG+SVEF+ TW+I+G +V+ I FF + L
Sbjct: 300 CSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQL 359
Query: 3501 PRIVNSSAIALIPKSNSATTMNDFRPISCCNVLYKCISKMLSARLRLVLPYLISPCQSAF 3680
+ N++ + LIPK+++A T+++FRPISC N LYK ISK+L++RL+ +L +I QSAF
Sbjct: 360 LKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAF 419
Query: 3681 VPQRNIGDNIMLAQALCKGYHLSSGLPRCAIKLDIKKAFDSLNWSFLFSALQRMGFPDKF 3860
+P R++ +N++LA + GY+ + PR +K+D+KKAFDS+ W F+ +AL+ + P+++
Sbjct: 420 LPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERY 479
Query: 3861 IAWVSTCIHTSMLSVKINGAIEGYFKAGSGLRQGDPMSPYLFVIAMEVLTACLKKGTDSV 4040
I W+ CI T ++ +NGA G+F++ GLRQGDP+SPYLFV+AMEV + L DS
Sbjct: 480 INWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSG 539
Query: 4041 GFKYHGLTENM-ISHLIFADDVFLFCNGDLTSISLLLESVNLFSSISGLMPNASKSQCFF 4217
YH ++ ISHL+FADDV +F +G +S+ + E+++ F+ SGL N KSQ F
Sbjct: 540 YIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQ 599
Query: 4218 GNVD--DAIIDWTLRSTGFQQGILPIKYLGLPLISTKLTARDCLPLILRITSKIETWTCK 4391
+D + I T + GF G PI+YLGLPL+ KL D PL+ ++++++ +W K
Sbjct: 600 AGLDLSERI---TSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSK 656
Query: 4392 FLSLAGRLLLLKTVLQGIQGYWSAYLFLQKGILRKLQSLFSRFLWTGSTVVKGCAKVAWV 4571
LS AGR L+ +V+ G+ +W + L KG ++K++SL S+FLW GS + +KV+WV
Sbjct: 657 ALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWV 716
Query: 4572 ECCYPKAEGGLGLRDLLDWNKAAIFFQLWRILHSNSQSIWISWVREKIIGSKPFWTMTIP 4751
+CC PK+EGGLG R +WNK + +W +L S+W W R +G FW +
Sbjct: 717 DCCLPKSEGGLGFRSFGEWNKTLLLRLIW-VLFDRDTSLWAQWQRHHRLGHASFWQVNAL 775
Query: 4752 YNGSWSLKKIFKAREEALSFIQYNVGVNSEFLFWHDPWSNGMPLAQRFGNEIISMCDSMK 4931
W+ K + R A FI+ VG FW D W++ PL + G+
Sbjct: 776 QTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLIKYLGDVGSRPLRIPF 835
Query: 4932 LDPVHTFIHNGQWRLPISN----HEKVMELRCLVSSVHIHRNDLISW--HGTDCKDVSIA 5093
V I WRLP+S + L L + +D SW DC+ S A
Sbjct: 836 SAKVADAIDGSGWRLPLSRSLTADSILSHLASLPPPSPLMVSDSYSWCVDDVDCQGFSAA 895
Query: 5094 TIWNSLRRVNASPPWLKAVWHSFSIPKCSLFLWLALQNRILTKDRMLRFNMVVDPNCVLC 5273
W LR W ++VW ++PK + W A NR+ T+ R++ + +V C LC
Sbjct: 896 KTWEVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLC 955
Query: 5274 NTGQLETVEHLFEQCPYTQSIFQRAGF------PLRCSWSNYLLGDFMVGQVTNVQELLG 5435
+ ET +HL C ++ +++ L C+W+ L + LL
Sbjct: 956 SF-DTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELL--SWTRQSTAAAPSLLR 1012
Query: 5436 YLYLSVAGHSIWRERNDRIH 5495
+ + +++WR+RN +H
Sbjct: 1013 KVVAQLVVYNLWRQRNLVLH 1032