BLASTX nr result

ID: Angelica23_contig00000067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00000067
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Viti...   355   1e-95
dbj|BAM05591.1| LIM transcription factor [Eucalyptus pyrocarpa] ...   346   5e-93
dbj|BAB84581.1| transcription factor LIM [Populus kitakamiensis]      345   1e-92
ref|XP_002320687.1| predicted protein [Populus trichocarpa] gi|1...   345   1e-92
dbj|BAD91878.1| transcription factor lim1 [Eucalyptus globulus] ...   344   2e-92

>ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
           gi|147785329|emb|CAN72849.1| hypothetical protein
           VITISV_013939 [Vitis vinifera]
           gi|302142193|emb|CBI19396.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  355 bits (910), Expect = 1e-95
 Identities = 164/178 (92%), Positives = 170/178 (95%), Gaps = 3/178 (1%)
 Frame = -1

Query: 875 MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 696
           MAFAGTTQKCMAC+KTVYLVDKLTADNR+YHKACFRCHHCKGTLKLGNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60

Query: 695 HFDQLFKRTGSLDKSFEGTPKIVKPEKSIDNEKA---KVSSMFAGTRDKCLACAKTVYPT 525
           HFDQLFKRTGSLDKSFEGTPKIVKPEK ID+EK    KVSSMFAGTRDKC+ C  TVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDSEKPIANKVSSMFAGTRDKCVGCKNTVYPT 120

Query: 524 EKVSVNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLYCRHHHTQLIKEKGNLSQLEGD 351
           EKV+VNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLYC+HHHTQLIKEKGNLSQLEGD
Sbjct: 121 EKVTVNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGD 178


>dbj|BAM05591.1| LIM transcription factor [Eucalyptus pyrocarpa]
           gi|383081879|dbj|BAM05592.1| LIM transcription factor
           [Eucalyptus globulus subsp. globulus]
          Length = 188

 Score =  346 bits (888), Expect = 5e-93
 Identities = 159/178 (89%), Positives = 165/178 (92%), Gaps = 3/178 (1%)
 Frame = -1

Query: 875 MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 696
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60

Query: 695 HFDQLFKRTGSLDKSFEGTPKIVKPEKSIDNEK---AKVSSMFAGTRDKCLACAKTVYPT 525
           HFDQLFKRTGSL+KSFEGTPKI KPEK ID E+    KVSSMF GTRDKC+ C  TVYPT
Sbjct: 61  HFDQLFKRTGSLEKSFEGTPKIAKPEKPIDGERPAATKVSSMFGGTRDKCVGCKSTVYPT 120

Query: 524 EKVSVNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLYCRHHHTQLIKEKGNLSQLEGD 351
           EKV+VNGT YHKSCFKCTHGGC ISPSNY+AHEG+LYCRHHHTQLIKEKGNLSQLEGD
Sbjct: 121 EKVTVNGTPYHKSCFKCTHGGCVISPSNYVAHEGKLYCRHHHTQLIKEKGNLSQLEGD 178


>dbj|BAB84581.1| transcription factor LIM [Populus kitakamiensis]
          Length = 197

 Score =  345 bits (884), Expect = 1e-92
 Identities = 159/178 (89%), Positives = 164/178 (92%), Gaps = 3/178 (1%)
 Frame = -1

Query: 875 MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 696
           MAFAGTTQKCMAC+KTVYLVDKLTADNR YHKACFRCHHCKGTLKLGNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRAYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60

Query: 695 HFDQLFKRTGSLDKSFEGTPKIVKPEKSIDNEK---AKVSSMFAGTRDKCLACAKTVYPT 525
           HFDQLFKRTGSLDKSFEGTPKIVKPEK +D EK    KVS+MFAGTR+KC  C  TVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPVDGEKPVSTKVSTMFAGTREKCFGCKNTVYPT 120

Query: 524 EKVSVNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLYCRHHHTQLIKEKGNLSQLEGD 351
           EKVSVNGT YHKSCFKC HGGCTISPSNYIAHEGRLYC+HHH QLIKEKGNLSQLEGD
Sbjct: 121 EKVSVNGTPYHKSCFKCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGD 178


>ref|XP_002320687.1| predicted protein [Populus trichocarpa] gi|18565116|dbj|BAB84582.1|
           transcription factor LIM [Populus kitakamiensis]
           gi|222861460|gb|EEE99002.1| predicted protein [Populus
           trichocarpa] gi|225626277|gb|ACN97188.1| LIM
           transcription factor [Populus trichocarpa]
           gi|254047524|gb|ACT64134.1| transcription factor Lim1
           [Populus deltoides] gi|254047526|gb|ACT64135.1|
           transcription factor Lim1 [Populus deltoides]
          Length = 197

 Score =  345 bits (884), Expect = 1e-92
 Identities = 159/178 (89%), Positives = 164/178 (92%), Gaps = 3/178 (1%)
 Frame = -1

Query: 875 MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 696
           MAFAGTTQKCMAC+KTVYLVDKLTADNR YHKACFRCHHCKGTLKLGNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRAYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60

Query: 695 HFDQLFKRTGSLDKSFEGTPKIVKPEKSIDNEK---AKVSSMFAGTRDKCLACAKTVYPT 525
           HFDQLFKRTGSLDKSFEGTPKIVKPEK +D EK    KVS+MFAGTR+KC  C  TVYPT
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPVDGEKPVSTKVSTMFAGTREKCFGCKNTVYPT 120

Query: 524 EKVSVNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLYCRHHHTQLIKEKGNLSQLEGD 351
           EKVSVNGT YHKSCFKC HGGCTISPSNYIAHEGRLYC+HHH QLIKEKGNLSQLEGD
Sbjct: 121 EKVSVNGTPYHKSCFKCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGD 178


>dbj|BAD91878.1| transcription factor lim1 [Eucalyptus globulus]
           gi|62087117|dbj|BAD91879.1| transcription factor lim1
           [Eucalyptus globulus] gi|62087119|dbj|BAD91880.1|
           transcription factor lim1 [Eucalyptus camaldulensis]
           gi|62087121|dbj|BAD91881.1| transcription factor lim1
           [Eucalyptus camaldulensis] gi|383081875|dbj|BAM05590.1|
           LIM transcription factor [Eucalyptus pilularis]
          Length = 188

 Score =  344 bits (883), Expect = 2e-92
 Identities = 157/178 (88%), Positives = 164/178 (92%), Gaps = 3/178 (1%)
 Frame = -1

Query: 875 MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 696
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRP 60

Query: 695 HFDQLFKRTGSLDKSFEGTPKIVKPEKSIDNEK---AKVSSMFAGTRDKCLACAKTVYPT 525
           HFDQLFKRTGSL+KSFEGTPKI KPEK +D E+    K SSMF GTRDKC+ C  TVYPT
Sbjct: 61  HFDQLFKRTGSLEKSFEGTPKIAKPEKPVDGERPAATKASSMFGGTRDKCVGCKSTVYPT 120

Query: 524 EKVSVNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLYCRHHHTQLIKEKGNLSQLEGD 351
           EKV+VNGT YHKSCFKCTHGGC ISPSNY+AHEG+LYCRHHHTQLIKEKGNLSQLEGD
Sbjct: 121 EKVTVNGTPYHKSCFKCTHGGCVISPSNYVAHEGKLYCRHHHTQLIKEKGNLSQLEGD 178



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = -1

Query: 884 KKRMAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLY 705
           K    F GT  KC+ C+ TVY  +K+T +   YHK+CF+C H    +   NY + EG LY
Sbjct: 98  KASSMFGGTRDKCVGCKSTVYPTEKVTVNGTPYHKSCFKCTHGGCVISPSNYVAHEGKLY 157

Query: 704 CRPHFDQLFKRTGSLDK 654
           CR H  QL K  G+L +
Sbjct: 158 CRHHHTQLIKEKGNLSQ 174


Top