BLASTX nr result

ID: Angelica23_contig00000021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00000021
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P92919.1|CB23_APIGR RecName: Full=Chlorophyll a-b binding pro...   425   e-117
dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein...   415   e-114
gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I p...   414   e-114
gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-bind...   412   e-113
ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [P...   410   e-112

>sp|P92919.1|CB23_APIGR RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Allergen=Api g 3; Flags: Precursor
           gi|1769849|emb|CAA99993.1| chlorophyll a/b binding
           protein [Apium graveolens]
          Length = 264

 Score =  425 bits (1093), Expect = e-117
 Identities = 206/213 (96%), Positives = 210/213 (98%)
 Frame = +3

Query: 123 GKAVQTAPSSSELFGNGRVSMRKTVKAPVSNSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 302
           GKAV+ APSSSELFGNGRVSMRKTVKAPVS+SPWYGPDRVKYLGPFSGEAPSYLTGEFPG
Sbjct: 15  GKAVKVAPSSSELFGNGRVSMRKTVKAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 74

Query: 303 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 482
           DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS
Sbjct: 75  DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 134

Query: 483 QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFD 662
           QIFSEGGLDYLGNPSLVHAQSIL+IWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFD
Sbjct: 135 QIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFD 194

Query: 663 PLGLADDPEAFAELKVKELKNGRLAMFSMFGFF 761
           PLGLA+DPE  AELKVKELKNGRLAMFSMFGFF
Sbjct: 195 PLGLAEDPERSAELKVKELKNGRLAMFSMFGFF 227


>dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
           [Lactuca sativa]
          Length = 266

 Score =  415 bits (1066), Expect = e-114
 Identities = 201/216 (93%), Positives = 208/216 (96%), Gaps = 3/216 (1%)
 Frame = +3

Query: 123 GKAVQTAPSSSELFGNGRVSMRKTV---KAPVSNSPWYGPDRVKYLGPFSGEAPSYLTGE 293
           G+AV+T+PSSSELFGNGRVSMRKT    KA  S SPWYGPDRVKYLGPFSGEAPSYLTGE
Sbjct: 14  GQAVKTSPSSSELFGNGRVSMRKTAAAKKAAPSGSPWYGPDRVKYLGPFSGEAPSYLTGE 73

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 473
           FPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK
Sbjct: 74  FPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 133

Query: 474 AGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGG 653
           AGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGE+VDPLYPGG
Sbjct: 134 AGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 193

Query: 654 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFF 761
           SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFF
Sbjct: 194 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 229


>gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I precursor [Panax
           ginseng]
          Length = 266

 Score =  414 bits (1065), Expect = e-114
 Identities = 201/215 (93%), Positives = 207/215 (96%), Gaps = 2/215 (0%)
 Frame = +3

Query: 123 GKAVQTAPSSSELFGNGRVSMRKTVKAPV--SNSPWYGPDRVKYLGPFSGEAPSYLTGEF 296
           G AV+ APSSSELFG+GR+SMRKT K P   S SPWYGPDRVKYLGPFSGEAPSYLTGEF
Sbjct: 15  GMAVKVAPSSSELFGSGRISMRKTGKKPAASSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74

Query: 297 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 476
           PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 134

Query: 477 GSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGS 656
           GSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGE+VDPLYPGGS
Sbjct: 135 GSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGS 194

Query: 657 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFF 761
           FDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFF
Sbjct: 195 FDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFF 229


>gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Artemisia annua]
          Length = 254

 Score =  412 bits (1058), Expect = e-113
 Identities = 200/216 (92%), Positives = 206/216 (95%), Gaps = 3/216 (1%)
 Frame = +3

Query: 123 GKAVQTAPSSSELFGNGRVSMRKTV---KAPVSNSPWYGPDRVKYLGPFSGEAPSYLTGE 293
           G+AV+ APS+SEL GNGRVSMRKT    K   S SPWYGPDRVKYLGPFSGEAPSYLTGE
Sbjct: 2   GQAVKAAPSNSELLGNGRVSMRKTAAPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGE 61

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 473
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK
Sbjct: 62  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 121

Query: 474 AGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGG 653
           AG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGE+VDPLYPGG
Sbjct: 122 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 181

Query: 654 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFF 761
           SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFF
Sbjct: 182 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFF 217


>ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
           gi|222859802|gb|EEE97349.1| light-harvesting complex II
           protein Lhcb1 [Populus trichocarpa]
          Length = 264

 Score =  410 bits (1053), Expect = e-112
 Identities = 195/213 (91%), Positives = 203/213 (95%)
 Frame = +3

Query: 123 GKAVQTAPSSSELFGNGRVSMRKTVKAPVSNSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 302
           GKAV+ +PSS EL GNGRVSMRKT K   S SPWYGPDRVKYLGPFSGE PSYLTGEFPG
Sbjct: 15  GKAVKLSPSSPELMGNGRVSMRKTTKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 74

Query: 303 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 482
           DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+
Sbjct: 75  DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGA 134

Query: 483 QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFD 662
           QIFSEGGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AGGPLGEI DP+YPGGSFD
Sbjct: 135 QIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFD 194

Query: 663 PLGLADDPEAFAELKVKELKNGRLAMFSMFGFF 761
           PLGLADDPEAFAELKVKELKNGRLAMFSMFGFF
Sbjct: 195 PLGLADDPEAFAELKVKELKNGRLAMFSMFGFF 227


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