BLASTX nr result

ID: Angelica22_contig00050715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00050715
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...   105   4e-21
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   105   4e-21
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...   105   4e-21
ref|XP_003579203.1| PREDICTED: uncharacterized protein LOC100839...   104   7e-21
ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [S...   103   1e-20

>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/97 (49%), Positives = 68/97 (70%)
 Frame = +2

Query: 2    DKSPGPDGMTPAFF*KHWKIVSNDVVEMVRHFFLTGEMLQGLNETNIVLIPKKKNPTIIG 181
            DK+PGPDG+T  F+   W+IV  DV++ V+ FF T  M Q +N TNI +IPK  NP  + 
Sbjct: 825  DKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLS 884

Query: 182  ELRPISLCNVLAKVITKVIANRMKGMLDGVVAENQTA 292
            + RPI+LCNVL K+I+K +  R+KG LD +V+++Q A
Sbjct: 885  DYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAA 921


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/96 (52%), Positives = 65/96 (67%)
 Frame = +2

Query: 5   KSPGPDGMTPAFF*KHWKIVSNDVVEMVRHFFLTGEMLQGLNETNIVLIPKKKNPTIIGE 184
           K+PGPDG+   F+ KHW IV  D+   V HFF TG +LQ  N+TNI LIPK + P    +
Sbjct: 457 KAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQTNICLIPKVERPEQACQ 516

Query: 185 LRPISLCNVLAKVITKVIANRMKGMLDGVVAENQTA 292
            RPISLCNV+ K+I+K+IANR+K +L  +V   Q A
Sbjct: 517 FRPISLCNVIYKIISKIIANRLKPILKSIVTPYQNA 552


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/97 (49%), Positives = 68/97 (70%)
 Frame = +2

Query: 2    DKSPGPDGMTPAFF*KHWKIVSNDVVEMVRHFFLTGEMLQGLNETNIVLIPKKKNPTIIG 181
            DK+PGPDG+T  F+   W+IV  DV++ V+ FF T  M Q +N TNI +IPK  NP  + 
Sbjct: 805  DKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLS 864

Query: 182  ELRPISLCNVLAKVITKVIANRMKGMLDGVVAENQTA 292
            + RPI+LCNVL K+I+K +  R+KG LD +V+++Q A
Sbjct: 865  DYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAA 901


>ref|XP_003579203.1| PREDICTED: uncharacterized protein LOC100839353 [Brachypodium
           distachyon]
          Length = 1236

 Score =  104 bits (260), Expect = 7e-21
 Identities = 47/96 (48%), Positives = 69/96 (71%)
 Frame = +2

Query: 5   KSPGPDGMTPAFF*KHWKIVSNDVVEMVRHFFLTGEMLQGLNETNIVLIPKKKNPTIIGE 184
           K+PGPDG    FF +HW  V  D++  VR+FF+TG M  G+N+T IVLIPK KNP  + +
Sbjct: 57  KAPGPDGFPARFFQRHWATVKKDIIRAVRNFFVTGAMPYGVNDTIIVLIPKIKNPMYLKD 116

Query: 185 LRPISLCNVLAKVITKVIANRMKGMLDGVVAENQTA 292
             PISLCNV+ KV+ K +ANR++ +L+ ++++ Q+A
Sbjct: 117 FCPISLCNVIYKVVAKCLANRLRPLLNVLISDAQSA 152


>ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [Sorghum bicolor]
           gi|241931675|gb|EES04820.1| hypothetical protein
           SORBIDRAFT_04g008547 [Sorghum bicolor]
          Length = 599

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/97 (47%), Positives = 67/97 (69%)
 Frame = +2

Query: 2   DKSPGPDGMTPAFF*KHWKIVSNDVVEMVRHFFLTGEMLQGLNETNIVLIPKKKNPTIIG 181
           +K+PGPDG T  F+  HW +V   + + V HF   G M +G+N+T IVLIPK K+P  + 
Sbjct: 463 NKAPGPDGFTAGFYQNHWDVVGPSITKAVIHFLNGGHMPEGINQTTIVLIPKVKHPQDLK 522

Query: 182 ELRPISLCNVLAKVITKVIANRMKGMLDGVVAENQTA 292
             RPISLCNV+ K+ +KV+ANR++  LD +++E Q+A
Sbjct: 523 NFRPISLCNVIYKICSKVLANRLRVFLDEIISEEQSA 559


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