BLASTX nr result

ID: Angelica22_contig00050560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00050560
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    95   7e-18
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    88   6e-16
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    87   1e-15
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    87   1e-15
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    87   1e-15

>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/118 (41%), Positives = 68/118 (57%)
 Frame = +1

Query: 1    FKYHWRTKPMKLNHIIFADYVFLFSFGDVRSISLLMHGVTEFSSYSGLTTNNAKSQCFFG 180
            F YH R + M L H+ FAD + +FS G   S+  ++    +F+++SGL  +  KS  F  
Sbjct: 942  FGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMA 1001

Query: 181  NVSVEIADSILEVIGFQRGTLPITYLGLPLPIGRLRDRDCVPLLNKLCSRIESWMTHF 354
            ++S E   SIL    F  G+LP+ YLGLPL   R+   DC+PLL K+ SRI SW   F
Sbjct: 1002 SISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRF 1059


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/118 (37%), Positives = 67/118 (56%)
 Frame = +1

Query: 1   FKYHWRTKPMKLNHIIFADYVFLFSFGDVRSISLLMHGVTEFSSYSGLTTNNAKSQCFFG 180
           F YH + + + L H+ FAD + + S G VRSI  ++  + EF+ +SGL  +  KS  +  
Sbjct: 575 FGYHPKCRAIGLTHLSFADDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLA 634

Query: 181 NVSVEIADSILEVIGFQRGTLPITYLGLPLPIGRLRDRDCVPLLNKLCSRIESWMTHF 354
            V   +   I++   F  G LP+ YLGLPL   RL   DC+PL+ +L  +IE+W + F
Sbjct: 635 GVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRF 692


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/114 (35%), Positives = 68/114 (59%)
 Frame = +1

Query: 1    FKYHWRTKPMKLNHIIFADYVFLFSFGDVRSISLLMHGVTEFSSYSGLTTNNAKSQCFFG 180
            F +H + + + L ++ FAD V LF  GD +S+S++M  + +FS  +GL  N AK Q FFG
Sbjct: 879  FNHHSKCEKIGLTNLTFADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFFG 938

Query: 181  NVSVEIADSILEVIGFQRGTLPITYLGLPLPIGRLRDRDCVPLLNKLCSRIESW 342
             +     +++  +  F  G LP+ YLG+PL   RL  +  +PL++K+  R++ W
Sbjct: 939  GMDGCSKENLRRITDFAEGKLPVRYLGMPLSCKRLTIQQYMPLIDKIVDRVKHW 992


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/118 (38%), Positives = 65/118 (55%)
 Frame = +1

Query: 1    FKYHWRTKPMKLNHIIFADYVFLFSFGDVRSISLLMHGVTEFSSYSGLTTNNAKSQCFFG 180
            F YH + K M L H+ FAD + + S G +RSI  ++    EF+ +SGL  +  KS  +  
Sbjct: 687  FGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLA 746

Query: 181  NVSVEIADSILEVIGFQRGTLPITYLGLPLPIGRLRDRDCVPLLNKLCSRIESWMTHF 354
             +S    + + +   F  G LP+ YLGLPL   RL   DC+PLL ++  RI SW + F
Sbjct: 747  GLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRF 804


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/114 (35%), Positives = 68/114 (59%)
 Frame = +1

Query: 1    FKYHWRTKPMKLNHIIFADYVFLFSFGDVRSISLLMHGVTEFSSYSGLTTNNAKSQCFFG 180
            F +H + + + L ++ FAD V LF  GD +S+S++M  + +FS  +GL  N AK Q FFG
Sbjct: 996  FNHHSKCEKIGLTNLTFADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFFG 1055

Query: 181  NVSVEIADSILEVIGFQRGTLPITYLGLPLPIGRLRDRDCVPLLNKLCSRIESW 342
             +     +++  +  F  G LP+ YLG+PL   RL  +  +PL++K+  R++ W
Sbjct: 1056 GMDGCSKENLRRITDFAEGKLPVRYLGVPLSCKRLTIQQYMPLIDKIVDRVKHW 1109


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