BLASTX nr result

ID: Angelica22_contig00050458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00050458
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
emb|CBI38358.3| unnamed protein product [Vitis vinifera]              117   1e-24
emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]   117   1e-24
ref|XP_002522388.1| pentatricopeptide repeat-containing protein,...   101   6e-20
ref|XP_004171057.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19

>ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 616

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/83 (62%), Positives = 69/83 (83%)
 Frame = +3

Query: 3   LNGLSNQTITLSKLIYFCALSKDGDIVYAHQLFDNVPEPNRHMYNSLIRGYSNSDDPTKA 182
           L+GL+N+T+TL KLI FCA+   GD+ YA ++FD +P+PN+ MYNSLIRGYSNSDDP  A
Sbjct: 13  LHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDA 72

Query: 183 VLVYQQMNYFGISPNEFTLPFIL 251
           VL++++M   G+SPNEFTLPF+L
Sbjct: 73  VLLFRRMICSGLSPNEFTLPFVL 95


>emb|CBI38358.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/83 (62%), Positives = 69/83 (83%)
 Frame = +3

Query: 3   LNGLSNQTITLSKLIYFCALSKDGDIVYAHQLFDNVPEPNRHMYNSLIRGYSNSDDPTKA 182
           L+GL+N+T+TL KLI FCA+   GD+ YA ++FD +P+PN+ MYNSLIRGYSNSDDP  A
Sbjct: 13  LHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDA 72

Query: 183 VLVYQQMNYFGISPNEFTLPFIL 251
           VL++++M   G+SPNEFTLPF+L
Sbjct: 73  VLLFRRMICSGLSPNEFTLPFVL 95


>emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
          Length = 688

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/83 (62%), Positives = 69/83 (83%)
 Frame = +3

Query: 3   LNGLSNQTITLSKLIYFCALSKDGDIVYAHQLFDNVPEPNRHMYNSLIRGYSNSDDPTKA 182
           L+GL+N+T+TL KLI FCA+   GD+ YA ++FD +P+PN+ MYNSLIRGYSNSDDP  A
Sbjct: 139 LHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDA 198

Query: 183 VLVYQQMNYFGISPNEFTLPFIL 251
           VL++++M   G+SPNEFTLPF+L
Sbjct: 199 VLLFRRMICSGLSPNEFTLPFVL 221


>ref|XP_002522388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538466|gb|EEF40072.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score =  101 bits (252), Expect = 6e-20
 Identities = 45/83 (54%), Positives = 64/83 (77%)
 Frame = +3

Query: 3   LNGLSNQTITLSKLIYFCALSKDGDIVYAHQLFDNVPEPNRHMYNSLIRGYSNSDDPTKA 182
           LN L++QT+TL KL+ FCA+S  G++ YAH +F+ +  PN+ MYNSLIRGY NS+ P K+
Sbjct: 13  LNNLTDQTLTLGKLVSFCAVSDAGNLDYAHLVFNQISIPNKFMYNSLIRGYCNSNSPIKS 72

Query: 183 VLVYQQMNYFGISPNEFTLPFIL 251
           + +Y+Q+   G+SPNEFT PF+L
Sbjct: 73  MFLYRQLIDSGLSPNEFTFPFVL 95


>ref|XP_004171057.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 415

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/83 (55%), Positives = 60/83 (72%)
 Frame = +3

Query: 3   LNGLSNQTITLSKLIYFCALSKDGDIVYAHQLFDNVPEPNRHMYNSLIRGYSNSDDPTKA 182
           L GL +Q ITL KLI FC++S+ GD+ YAH +FD++P+PN+ M+N LIRGYS S  P  A
Sbjct: 13  LQGLVSQNITLGKLISFCSVSQVGDLHYAHLVFDHLPQPNKFMFNCLIRGYSTSPHPINA 72

Query: 183 VLVYQQMNYFGISPNEFTLPFIL 251
           + +Y QM   G  PN FTLPF+L
Sbjct: 73  IFLYVQMMRSGFLPNRFTLPFVL 95


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