BLASTX nr result

ID: Angelica22_contig00050358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00050358
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39579.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26
ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002512497.1| pentatricopeptide repeat-containing protein,...   115   3e-24
ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23

>emb|CBI39579.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/102 (55%), Positives = 76/102 (74%)
 Frame = -2

Query: 308 FVSVCAASNKLSYAYTLFQHSPNPNILLFNSIIKAFSVHPPFHRSFHLFSVMRNRGIWSN 129
           F+SVC A +K+ YA  +F  + NPN+LLFNS+IK +S+  P   S  LFS M+NRGIW +
Sbjct: 47  FISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPD 106

Query: 128 EFTLSPLFKSCSNILDFRLGQGLHGEVVVMGFECFSNIRFGL 3
           EFT +PL KSCS I D R+G+G+HG V+V+GFE FS+IR G+
Sbjct: 107 EFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRIGI 148


>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
           [Vitis vinifera]
          Length = 485

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/102 (55%), Positives = 76/102 (74%)
 Frame = -2

Query: 308 FVSVCAASNKLSYAYTLFQHSPNPNILLFNSIIKAFSVHPPFHRSFHLFSVMRNRGIWSN 129
           F+SVC A +K+ YA  +F  + NPN+LLFNS+IK +S+  P   S  LFS M+NRGIW +
Sbjct: 47  FISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPD 106

Query: 128 EFTLSPLFKSCSNILDFRLGQGLHGEVVVMGFECFSNIRFGL 3
           EFT +PL KSCS I D R+G+G+HG V+V+GFE FS+IR G+
Sbjct: 107 EFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRIGI 148


>ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|222871649|gb|EEF08780.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  119 bits (297), Expect = 3e-25
 Identities = 53/102 (51%), Positives = 79/102 (77%)
 Frame = -2

Query: 308 FVSVCAASNKLSYAYTLFQHSPNPNILLFNSIIKAFSVHPPFHRSFHLFSVMRNRGIWSN 129
           FVS+C + NK++YA  +F+ + NP I+LFN++IK +S++ PF  SF LFS M+NRGIW +
Sbjct: 47  FVSICGSLNKMAYANRIFKQTQNPTIILFNAMIKGYSLNGPFEESFRLFSSMKNRGIWPD 106

Query: 128 EFTLSPLFKSCSNILDFRLGQGLHGEVVVMGFECFSNIRFGL 3
           E+TL+PL K+CS++   +LG+ +H EV+V+GFE FS IR G+
Sbjct: 107 EYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFEGFSAIRIGV 148


>ref|XP_002512497.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548458|gb|EEF49949.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 459

 Score =  115 bits (289), Expect = 3e-24
 Identities = 49/102 (48%), Positives = 74/102 (72%)
 Frame = -2

Query: 308 FVSVCAASNKLSYAYTLFQHSPNPNILLFNSIIKAFSVHPPFHRSFHLFSVMRNRGIWSN 129
           F+SVC + NK+ YA  +F  S NPNIL FN+++K +S+  PF  S   FS M+ RGIW +
Sbjct: 205 FISVCGSENKMPYANRVFLQSVNPNILPFNAMVKGYSLCGPFEESLSFFSSMKRRGIWPD 264

Query: 128 EFTLSPLFKSCSNILDFRLGQGLHGEVVVMGFECFSNIRFGL 3
           E+T +PL K+CS++ D +LGQ +H +V+++GFECF +I+ G+
Sbjct: 265 EYTFAPLLKACSSLYDLKLGQCIHKDVIMIGFECFCSIQIGV 306


>ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Glycine max]
          Length = 483

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/99 (54%), Positives = 72/99 (72%)
 Frame = -2

Query: 308 FVSVCAASNKLSYAYTLFQHSPNPNILLFNSIIKAFSVHPPFHRSFHLFSVMRNRGIWSN 129
           FVSVCA+  ++ YA  LF H+ NPNILLFN+IIKA S+HPPFH SF  FS+M+ R I  +
Sbjct: 46  FVSVCASLRRVPYATRLFAHTHNPNILLFNAIIKAHSLHPPFHASFSFFSLMKTRAISPD 105

Query: 128 EFTLSPLFKSCSNILDFRLGQGLHGEVVVMGFECFSNIR 12
           E+TL+PLFKS SN+  + LG  +H  VV +GF   +++R
Sbjct: 106 EYTLAPLFKSASNLRYYVLGGCVHAHVVRLGFTRHASVR 144


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