BLASTX nr result

ID: Angelica22_contig00050085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00050085
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   135   3e-30
emb|CBI36234.3| unnamed protein product [Vitis vinifera]              132   3e-29

>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  141 bits (356), Expect = 5e-32
 Identities = 61/82 (74%), Positives = 71/82 (86%)
 Frame = +1

Query: 34   VESLKAEVLCGHSERLAIAFGLLNTAPGMPILVTKNLYMCKSCHTTIKFISKVVRREISV 213
            +++ KAE+ CGHSERLAIAFGL+NT PG PI VTKNLYMC++CH T+KFISKVVRR ISV
Sbjct: 788  IDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISV 847

Query: 214  RDTDHFHQFNDGICSCRDEGYW 279
            RDT+ FH F DG+CSC DEGYW
Sbjct: 848  RDTEQFHHFKDGVCSCGDEGYW 869


>ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  138 bits (347), Expect = 5e-31
 Identities = 59/82 (71%), Positives = 69/82 (84%)
 Frame = +1

Query: 34   VESLKAEVLCGHSERLAIAFGLLNTAPGMPILVTKNLYMCKSCHTTIKFISKVVRREISV 213
            +ES +A++ CGHSER AIAFGL+NTAPGMPI VTKNLYMC SCH  +KFIS +VRREISV
Sbjct: 791  IESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISV 850

Query: 214  RDTDHFHQFNDGICSCRDEGYW 279
            RD + +H F DG+CSC DEGYW
Sbjct: 851  RDVEEYHHFKDGVCSCGDEGYW 872


>ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|222840702|gb|EEE78249.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score =  137 bits (345), Expect = 9e-31
 Identities = 60/88 (68%), Positives = 75/88 (85%)
 Frame = +1

Query: 4   NARELSSGTGVESLKAEVLCGHSERLAIAFGLLNTAPGMPILVTKNLYMCKSCHTTIKFI 183
           N +E SS  G+++ KA++ CGHSER AIA+ L+N+APGMPI VTKNLYMC+SCH+T+KFI
Sbjct: 718 NGQECSSMDGIQTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFI 777

Query: 184 SKVVRREISVRDTDHFHQFNDGICSCRD 267
           SK+VRREISVRDT+ FH F DG+CSC D
Sbjct: 778 SKIVRREISVRDTEQFHHFKDGLCSCGD 805


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  135 bits (341), Expect = 3e-30
 Identities = 58/82 (70%), Positives = 68/82 (82%)
 Frame = +1

Query: 34   VESLKAEVLCGHSERLAIAFGLLNTAPGMPILVTKNLYMCKSCHTTIKFISKVVRREISV 213
            +ES +A++ CGHSER AIAFGL+NTAPGMPI V KNLYMC SCH  +KFIS +VRREISV
Sbjct: 791  IESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISV 850

Query: 214  RDTDHFHQFNDGICSCRDEGYW 279
            RD + +H F DG+CSC DEGYW
Sbjct: 851  RDVEEYHHFKDGVCSCGDEGYW 872


>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/79 (73%), Positives = 68/79 (86%)
 Frame = +1

Query: 34   VESLKAEVLCGHSERLAIAFGLLNTAPGMPILVTKNLYMCKSCHTTIKFISKVVRREISV 213
            +++ KAE+ CGHSERLAIAFGL+NT PG PI VTKNLYMC++CH T+KFISKVVRR ISV
Sbjct: 788  IDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISV 847

Query: 214  RDTDHFHQFNDGICSCRDE 270
            RDT+ FH F DG+CSC DE
Sbjct: 848  RDTEQFHHFKDGVCSCGDE 866


Top