BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00050073
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc...    96   2e-18
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...    96   3e-18
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...    95   5e-18
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...    95   5e-18
gb|AAP12935.1| retrotransposon protein, putative, unclassified [...    94   1e-17

>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1303

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/113 (48%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
 Frame = +2

Query: 5    VVTPQQSRVPSTLETSPTTEGSSVTQSSDEDSEPRRFRLLSDIYNETEEIELEDD----M 172
            V  P   + P+  E S T E S  T  SD+   P R+R L+DI  E   ++L D+     
Sbjct: 746  VEEPVGEQQPALAEQSTTVEASLSTAGSDDG--PLRYRSLADIMLEAPRVDLVDEEDGEA 803

Query: 173  LLVSIEEPTNYNEAAKEEEWRKAMQAELEAIERNKTWVLTDLPEGHKAIGLKW 331
            LL   EEP++Y EAA E  W  AMQ ELEAIE+N TW L  LP GHKAIGLKW
Sbjct: 804  LLAETEEPSSYREAAGEPAWVDAMQKELEAIEKNSTWSLCTLPVGHKAIGLKW 856


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
           copia-type polyprotein [Glycine max]
          Length = 1042

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/107 (45%), Positives = 69/107 (64%)
 Frame = +2

Query: 11  TPQQSRVPSTLETSPTTEGSSVTQSSDEDSEPRRFRLLSDIYNETEEIELEDDMLLVSIE 190
           TP  S  PST E S ++EGSS          PRR R + ++Y+ETE I   D   L    
Sbjct: 476 TPALSPTPSTNEASSSSEGSS-------SERPRRMRNIQELYDETEVIN--DLFCLFVDS 526

Query: 191 EPTNYNEAAKEEEWRKAMQAELEAIERNKTWVLTDLPEGHKAIGLKW 331
           +P N++EA K++ WR+AM+ E++AIE+N TW L+ LP+GH+AIG+KW
Sbjct: 527 KPLNFDEAMKDKRWRQAMEEEIKAIEKNNTWELSSLPKGHEAIGVKW 573


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108710383|gb|ABF98178.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 56/117 (47%), Positives = 70/117 (59%), Gaps = 14/117 (11%)
 Frame = +2

Query: 23   SRVPSTLETSPTTEGSSVTQSSD---------EDSEPRRFRLLSDIYNETEEIELEDD-- 169
            +R   TL ++PT  GSS T S++          D EP R+R L++I  E   ++L +D  
Sbjct: 800  ARFSPTLPSTPTL-GSSSTHSAEVQASPRTAGSDDEPVRYRSLAEIMIEAPRVDLVEDDD 858

Query: 170  ---MLLVSIEEPTNYNEAAKEEEWRKAMQAELEAIERNKTWVLTDLPEGHKAIGLKW 331
                LLV +EEPT+Y EAA E  W  AM  ELEAIE+NKTW L  LP  HKAIGLKW
Sbjct: 859  DTEALLVEMEEPTSYREAAGEPAWVNAMNKELEAIEKNKTWSLCMLPASHKAIGLKW 915


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 11/105 (10%)
 Frame = +2

Query: 50   SPTTEGSSVTQSS------DEDSEPRRFRLLSDIYNETEEIELEDD-----MLLVSIEEP 196
            SP+T  + V  S       D D  PRR+R L+D+  E   ++L +D      LL   EEP
Sbjct: 838  SPSTNSAGVVPSPGTDDNIDTDDGPRRYRSLADVLREAPRVDLVEDECDGEALLAESEEP 897

Query: 197  TNYNEAAKEEEWRKAMQAELEAIERNKTWVLTDLPEGHKAIGLKW 331
            ++Y EAA +  W +AMQ E+EAIE+NKTW L  LP GH+AIGLKW
Sbjct: 898  SSYREAAGQPAWEEAMQREMEAIEKNKTWELAMLPAGHRAIGLKW 942


>gb|AAP12935.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1283

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 55/123 (44%), Positives = 70/123 (56%), Gaps = 13/123 (10%)
 Frame = +2

Query: 2    EVVTPQQSRVPSTLETSPTTEGSSVTQSSD---------EDSEPRRFRLLSDIYNETEEI 154
            +V TP   ++    E +PT  GS+ T S++          D  P R+R L+DI  E   +
Sbjct: 724  KVTTPNLKKLDDRSEHTPTP-GSTSTHSAEVEASLSTAGSDDGPLRYRSLADIMLEAPRV 782

Query: 155  ELEDD----MLLVSIEEPTNYNEAAKEEEWRKAMQAELEAIERNKTWVLTDLPEGHKAIG 322
            +L D+     LL   EEP++Y EAA E  W  AMQ ELEAIE+N TW L  LP GHKAIG
Sbjct: 783  DLVDEEDGEALLAETEEPSSYREAAGEPAWVDAMQKELEAIEKNSTWSLCTLPVGHKAIG 842

Query: 323  LKW 331
            LKW
Sbjct: 843  LKW 845