BLASTX nr result

ID: Angelica22_contig00050027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00050027
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601068.1| RING finger protein [Medicago truncatula] gi...    79   3e-13
ref|XP_002302246.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002284442.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    76   2e-12
emb|CAN68008.1| hypothetical protein VITISV_014950 [Vitis vinifera]    76   2e-12
ref|XP_003522583.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    74   2e-11

>ref|XP_003601068.1| RING finger protein [Medicago truncatula]
           gi|355490116|gb|AES71319.1| RING finger protein
           [Medicago truncatula]
          Length = 328

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/76 (51%), Positives = 51/76 (67%)
 Frame = +3

Query: 3   IASENPSEIICPRCFGQFLDEITVTRPRFIDLFTEFDPSPESRILEALALMLNPSLGLPP 182
           +A  N S++ICPRCFGQF+ EI + RPR +  FT  DPSPE+R+LEAL++ML+     PP
Sbjct: 31  VAPYNSSDLICPRCFGQFICEINIPRPRLVVDFTAHDPSPEARLLEALSIMLD-----PP 85

Query: 183 RNNQNPGLQTTNSRRS 230
               NP  QT   RR+
Sbjct: 86  IRRFNPETQTRRPRRA 101


>ref|XP_002302246.1| predicted protein [Populus trichocarpa] gi|222843972|gb|EEE81519.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/56 (64%), Positives = 45/56 (80%)
 Frame = +3

Query: 3   IASENPSEIICPRCFGQFLDEITVTRPRFIDLFTEFDPSPESRILEALALMLNPSL 170
           IA+ +PSEIICPRC GQFL EI + RP  +  FT FDPSPE+R+LEAL+LML+P +
Sbjct: 31  IATTDPSEIICPRCSGQFLCEIGINRPILVVDFTAFDPSPEARLLEALSLMLDPPI 86


>ref|XP_002284442.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 333

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/56 (62%), Positives = 44/56 (78%)
 Frame = +3

Query: 3   IASENPSEIICPRCFGQFLDEITVTRPRFIDLFTEFDPSPESRILEALALMLNPSL 170
           IAS+NPS+IICPRC GQFL EI  TRPR  +    +DP PE+R+LEAL+L+L+P L
Sbjct: 30  IASDNPSQIICPRCLGQFLQEIDTTRPRAFNEIITWDPFPEARLLEALSLVLDPPL 85


>emb|CAN68008.1| hypothetical protein VITISV_014950 [Vitis vinifera]
          Length = 409

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/56 (62%), Positives = 44/56 (78%)
 Frame = +3

Query: 3   IASENPSEIICPRCFGQFLDEITVTRPRFIDLFTEFDPSPESRILEALALMLNPSL 170
           IAS+NPS+IICPRC GQFL EI  TRPR  +    +DP PE+R+LEAL+L+L+P L
Sbjct: 30  IASDNPSQIICPRCLGQFLQEIDTTRPRAFNEIITWDPFPEARLLEALSLVLDPPL 85


>ref|XP_003522583.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 309

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
 Frame = +3

Query: 9   SENPSEIICPRCFGQFLDEITVTRPRFIDLFTEFDPSPESRILEALALMLNPSLG----- 173
           + NP++I CPRCFGQF+ EI + RPR +  FT  DPSPE+R+LEAL+LM++P +      
Sbjct: 38  NNNPTQITCPRCFGQFICEINMPRPRLVVDFTTPDPSPEARLLEALSLMMDPPIRRFPGL 97

Query: 174 LPPRNNQNPGLQTTNSRRSRRNH 242
           + P+  + P       RR RR H
Sbjct: 98  IQPQPEELPVYH--RHRRPRRRH 118


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