BLASTX nr result

ID: Angelica22_contig00049998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049998
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]   136   2e-30
ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|XP_002511861.1| pentatricopeptide repeat-containing protein,...   114   8e-24
ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group] g...   108   4e-22
emb|CBI27814.3| unnamed protein product [Vitis vinifera]              106   2e-21

>emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/113 (58%), Positives = 82/113 (72%)
 Frame = -3

Query: 346 LSRRGYVKEALEFVNKLPIEPDIRIWGALLAGCRKNSDSIEVAEVAVHRLMSLDPESTSY 167
           +SRRG ++ AL+FVNK+P+EPD RIWGALLAGCR    SIE+AE+   RL+ LDP++TSY
Sbjct: 538 ISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQNTSY 597

Query: 166 LVFLSNLYAEQNRWEDVDRLRNFVEEKGLKKDAGCSIVATNF*TALCFSWEKD 8
            V LSNLYAEQ RW DV+RLR  V+EKGLKK+ G S++        C    KD
Sbjct: 598 YVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYSMIEAQL--DFCLERRKD 648


>ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 804

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/94 (65%), Positives = 76/94 (80%)
 Frame = -3

Query: 346 LSRRGYVKEALEFVNKLPIEPDIRIWGALLAGCRKNSDSIEVAEVAVHRLMSLDPESTSY 167
           +SRRG ++ AL+FVNK+P+EPD RIWGALLAGCR    SIE+AE+   RL+ LDP++TSY
Sbjct: 459 ISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQNTSY 518

Query: 166 LVFLSNLYAEQNRWEDVDRLRNFVEEKGLKKDAG 65
            V LSNLYAEQ RW DV+RLR  V+EKGLKK+ G
Sbjct: 519 YVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMG 552


>ref|XP_002511861.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549041|gb|EEF50530.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 751

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/89 (62%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
 Frame = -3

Query: 346 LSRRGYVKEALEFVNKLPIEPDIRIWGALLAGCRKNSD-SIEVAEVAVHRLMSLDPESTS 170
           LSR G+++EAL FV K+P+ PD RIWGA+LAGCR   D SIEVAE  V +L +LDPE+TS
Sbjct: 459 LSRHGHIEEALMFVKKMPVVPDKRIWGAVLAGCRSRGDGSIEVAEFVVRQLSALDPENTS 518

Query: 169 YLVFLSNLYAEQNRWEDVDRLRNFVEEKG 83
           Y V L +LYAEQ RW+DV+RL   V+EKG
Sbjct: 519 YYVTLLDLYAEQGRWKDVERLTKIVDEKG 547


>ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
           gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|113531711|dbj|BAF04094.1|
           Os01g0176300 [Oryza sativa Japonica Group]
           gi|125569234|gb|EAZ10749.1| hypothetical protein
           OsJ_00586 [Oryza sativa Japonica Group]
          Length = 665

 Score =  108 bits (271), Expect = 4e-22
 Identities = 48/101 (47%), Positives = 74/101 (73%)
 Frame = -3

Query: 346 LSRRGYVKEALEFVNKLPIEPDIRIWGALLAGCRKNSDSIEVAEVAVHRLMSLDPESTSY 167
           L R G +KEAL+ ++K+P++P+  IWG LLA CR   +S E+ E+A  RL+ LDP++++ 
Sbjct: 440 LGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNS-EIGELAAERLLELDPDNSTA 498

Query: 166 LVFLSNLYAEQNRWEDVDRLRNFVEEKGLKKDAGCSIVATN 44
            + LSN+YA+ NRW+DV R+R  + EKG+KK+ GCS++  N
Sbjct: 499 YILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMN 539


>emb|CBI27814.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/101 (48%), Positives = 71/101 (70%)
 Frame = -3

Query: 346 LSRRGYVKEALEFVNKLPIEPDIRIWGALLAGCRKNSDSIEVAEVAVHRLMSLDPESTSY 167
           L R G + EA EF++K+P+EPD+ +WGALL  CR +S+ +E+AE+   +L  LDP++ ++
Sbjct: 435 LGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSN-LELAELVAEKLFLLDPQTVTF 493

Query: 166 LVFLSNLYAEQNRWEDVDRLRNFVEEKGLKKDAGCSIVATN 44
            V +SN+YAE  RWED  RLR  +EE+ LKK  G S+V  N
Sbjct: 494 YVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVN 534


Top