BLASTX nr result

ID: Angelica22_contig00049787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049787
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   146   1e-33
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   146   1e-33
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] g...   144   6e-33
ref|XP_002879976.1| hypothetical protein ARALYDRAFT_483318 [Arab...   144   7e-33

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  146 bits (369), Expect = 1e-33
 Identities = 71/83 (85%), Positives = 78/83 (93%)
 Frame = -1

Query: 250  FGEGLGMKVVELSGETAMDLELLEKGQLIISTPDKWDALSRCWKQHKHVQQVSLFIIDEL 71
            FG GLGM+VVEL+GETA DL+LLE+GQ+IISTP+KWDALSR WKQ KHVQQVSLFIIDEL
Sbjct: 1429 FGRGLGMRVVELTGETATDLKLLERGQVIISTPEKWDALSRRWKQRKHVQQVSLFIIDEL 1488

Query: 70   HLIGGYGGPILEVIVSRMRYIAS 2
            HLIGG GGP+LEVIVSRMRYIAS
Sbjct: 1489 HLIGGQGGPVLEVIVSRMRYIAS 1511



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/71 (42%), Positives = 49/71 (69%)
 Frame = -1

Query: 232 MKVVELSGETAMDLELLEKGQLIISTPDKWDALSRCWKQHKHVQQVSLFIIDELHLIGGY 53
           +KV ELSG+ ++  + +E+ Q+I++TP+KWD ++R      + Q V L I+DE+HL+   
Sbjct: 595 VKVKELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDN 654

Query: 52  GGPILEVIVSR 20
            GP+LE IV+R
Sbjct: 655 RGPVLESIVAR 665


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  146 bits (369), Expect = 1e-33
 Identities = 71/83 (85%), Positives = 78/83 (93%)
 Frame = -1

Query: 250  FGEGLGMKVVELSGETAMDLELLEKGQLIISTPDKWDALSRCWKQHKHVQQVSLFIIDEL 71
            FG GLGM+VVEL+GETA DL+LLE+GQ+IISTP+KWDALSR WKQ KHVQQVSLFIIDEL
Sbjct: 1396 FGRGLGMRVVELTGETATDLKLLERGQVIISTPEKWDALSRRWKQRKHVQQVSLFIIDEL 1455

Query: 70   HLIGGYGGPILEVIVSRMRYIAS 2
            HLIGG GGP+LEVIVSRMRYIAS
Sbjct: 1456 HLIGGQGGPVLEVIVSRMRYIAS 1478



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/71 (42%), Positives = 49/71 (69%)
 Frame = -1

Query: 232 MKVVELSGETAMDLELLEKGQLIISTPDKWDALSRCWKQHKHVQQVSLFIIDELHLIGGY 53
           +KV ELSG+ ++  + +E+ Q+I++TP+KWD ++R      + Q V L I+DE+HL+   
Sbjct: 562 VKVKELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDN 621

Query: 52  GGPILEVIVSR 20
            GP+LE IV+R
Sbjct: 622 RGPVLESIVAR 632


>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
            predicted protein [Populus trichocarpa]
          Length = 2157

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/83 (85%), Positives = 78/83 (93%)
 Frame = -1

Query: 250  FGEGLGMKVVELSGETAMDLELLEKGQLIISTPDKWDALSRCWKQHKHVQQVSLFIIDEL 71
            FG GLGM+VVEL+GETA DL+LLEKGQ+IISTP+KWDALSR WKQ K+VQQVSLFIIDEL
Sbjct: 1406 FGRGLGMRVVELTGETATDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDEL 1465

Query: 70   HLIGGYGGPILEVIVSRMRYIAS 2
            HLIGG GGP+LEVIVSRMRYIAS
Sbjct: 1466 HLIGGQGGPVLEVIVSRMRYIAS 1488


>ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata]
            gi|297338984|gb|EFH69401.1| EMB1507 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 2171

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/83 (81%), Positives = 80/83 (96%)
 Frame = -1

Query: 250  FGEGLGMKVVELSGETAMDLELLEKGQLIISTPDKWDALSRCWKQHKHVQQVSLFIIDEL 71
            FG+GLG++VVEL+GETA+DL+LLEKGQ+IISTP+KWDALSR WKQ K+VQQVSLFI+DEL
Sbjct: 1422 FGKGLGLRVVELTGETALDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIVDEL 1481

Query: 70   HLIGGYGGPILEVIVSRMRYIAS 2
            HLIGG GGP+LEVIVSRMRYI+S
Sbjct: 1482 HLIGGQGGPVLEVIVSRMRYISS 1504



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/72 (43%), Positives = 48/72 (66%)
 Frame = -1

Query: 235 GMKVVELSGETAMDLELLEKGQLIISTPDKWDALSRCWKQHKHVQQVSLFIIDELHLIGG 56
           G+ V ELSG+ ++    +E+ Q+I++TP+KWD ++R      + Q V L IIDE+HL+  
Sbjct: 587 GVTVRELSGDQSLTGREIEETQIIVTTPEKWDIITRKSGDRTYTQLVRLLIIDEIHLLHD 646

Query: 55  YGGPILEVIVSR 20
             GP+LE IV+R
Sbjct: 647 NRGPVLESIVAR 658


>ref|XP_002879976.1| hypothetical protein ARALYDRAFT_483318 [Arabidopsis lyrata subsp.
            lyrata] gi|297325815|gb|EFH56235.1| hypothetical protein
            ARALYDRAFT_483318 [Arabidopsis lyrata subsp. lyrata]
          Length = 2168

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/83 (80%), Positives = 80/83 (96%)
 Frame = -1

Query: 250  FGEGLGMKVVELSGETAMDLELLEKGQLIISTPDKWDALSRCWKQHKHVQQVSLFIIDEL 71
            FG+GLG++VVEL+GETA+DL+LLEKGQ+IISTP+KWDALSR WKQ K++QQVSLFI+DEL
Sbjct: 1423 FGKGLGLRVVELTGETALDLKLLEKGQIIISTPEKWDALSRRWKQRKYIQQVSLFIVDEL 1482

Query: 70   HLIGGYGGPILEVIVSRMRYIAS 2
            HLIGG GGP+LEVIVSRMRYI+S
Sbjct: 1483 HLIGGQGGPVLEVIVSRMRYISS 1505



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/72 (41%), Positives = 49/72 (68%)
 Frame = -1

Query: 235 GMKVVELSGETAMDLELLEKGQLIISTPDKWDALSRCWKQHKHVQQVSLFIIDELHLIGG 56
           G+ V ELSG+ ++  + +++ Q+I++TP+KWD ++R      + Q V L IIDE+HL+  
Sbjct: 588 GVTVKELSGDQSLTGQEIKETQIIVTTPEKWDIITRKSGDRTYTQLVRLLIIDEIHLLHD 647

Query: 55  YGGPILEVIVSR 20
             GP+LE IV+R
Sbjct: 648 NRGPVLESIVAR 659


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