BLASTX nr result

ID: Angelica22_contig00049781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049781
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni...    68   9e-10
ref|XP_004139015.1| PREDICTED: small subunit processome componen...    68   9e-10
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm...    65   7e-09
emb|CBI17281.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component
           20 homolog, partial [Cucumis sativus]
          Length = 2538

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/97 (34%), Positives = 55/97 (56%)
 Frame = +3

Query: 9   DIIKALNDSIEASEEEVVYLLLIFFERLDXXXXXXXXXXXXXXXXKVLNFFQQIIKNWVQ 188
           +I++ +N+S+E+S EEV+YLLL F ERL                 K+ NF  +I++ W++
Sbjct: 326 NILRVMNESLESSPEEVIYLLLSFSERLPTEVLGTSEEEIP----KINNFILKILRQWIK 381

Query: 189 AVNDKIHGNPSCVQFQENKLVVLYGVVRSFPYVIDVQ 299
            + D +  + S +   E+KL   +GVVR  PY++  Q
Sbjct: 382 EITDFVQHSSSTIDINESKLATFWGVVRCCPYILKFQ 418


>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
           sativus]
          Length = 2696

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/97 (34%), Positives = 55/97 (56%)
 Frame = +3

Query: 9   DIIKALNDSIEASEEEVVYLLLIFFERLDXXXXXXXXXXXXXXXXKVLNFFQQIIKNWVQ 188
           +I++ +N+S+E+S EEV+YLLL F ERL                 K+ NF  +I++ W++
Sbjct: 458 NILRVMNESLESSPEEVIYLLLSFSERLPTEVLGTSEEEIP----KINNFILKILRQWIK 513

Query: 189 AVNDKIHGNPSCVQFQENKLVVLYGVVRSFPYVIDVQ 299
            + D +  + S +   E+KL   +GVVR  PY++  Q
Sbjct: 514 EITDFVQHSSSTIDINESKLATFWGVVRCCPYILKFQ 550


>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
           gi|223542637|gb|EEF44174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2535

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
 Frame = +3

Query: 6   IDIIKALNDSIEASEEEVVYLLLIFFERL--DXXXXXXXXXXXXXXXXKVLNFFQQIIKN 179
           ++I+ A+ND +E S++EVV LL+ F ERL  D                ++  F +  + +
Sbjct: 427 VNILSAMNDLMETSQKEVVCLLMSFCERLQEDSLGSGFLDGTSEEGLSRIRGFLKGTMCS 486

Query: 180 WVQAVNDKIHGNPSCVQFQENKLVVLYGVVRSFPYVIDVQ 299
           WV  +N+   GNPSC    +++L +L+GV+  +PY++D++
Sbjct: 487 WVGMINNITLGNPSCTVISKDELALLWGVICCYPYMMDIR 526


>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
 Frame = +3

Query: 6   IDIIKALNDSIEASEEEVVYLLLIFFERL--DXXXXXXXXXXXXXXXXKVLNFFQQIIKN 179
           I+I+ A+N  IE S EEV++L+L+F ERL  D                ++ +F Q+ +  
Sbjct: 441 INILSAMNSLIETSPEEVIFLMLMFNERLQVDMQSSSFLVEASEEGVSRICSFLQEALLY 500

Query: 180 WVQAVNDKIHGNPSCVQFQENKLVVLYGVVRSFPYVIDVQ 299
           W   +N+ +H + S V   E KL +L+G++    +++ +Q
Sbjct: 501 WTGVINNIVHKDLSSVPSCEVKLPMLWGIIGCCSHMLGIQ 540


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