BLASTX nr result

ID: Angelica22_contig00049748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049748
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...   107   1e-21
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...   107   1e-21
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]   103   1e-20
emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]   101   7e-20
emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera]   100   1e-19

>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
            11.19) [Arabidopsis thaliana]
          Length = 1633

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/84 (59%), Positives = 67/84 (79%)
 Frame = -2

Query: 256  YKARLVARGFTQTEGLDFFETFAPVAKMSTVRVLLYLATISQWSVTQLDVINAFLYGKLE 77
            YKARLVA+GFTQ EG+D+ ETF+PVAK  +V++LL LA  + WS+TQ+DV NAFL+G+L+
Sbjct: 999  YKARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAATGWSLTQMDVSNAFLHGELD 1058

Query: 76   EEVYLSIPQGYCLPTEFATYSSSV 5
            EE+Y+S+PQGY  PT  +  S  V
Sbjct: 1059 EEIYMSLPQGYTPPTGISLPSKPV 1082


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
           gi|7267797|emb|CAB81200.1| putative retrotransposon
           polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/84 (59%), Positives = 67/84 (79%)
 Frame = -2

Query: 256 YKARLVARGFTQTEGLDFFETFAPVAKMSTVRVLLYLATISQWSVTQLDVINAFLYGKLE 77
           YKARLVA+GFTQ EG+D+ ETF+PVAK  +V++LL LA  + WS+TQ+DV NAFL+G+L+
Sbjct: 585 YKARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAATGWSLTQMDVSNAFLHGELD 644

Query: 76  EEVYLSIPQGYCLPTEFATYSSSV 5
           EE+Y+S+PQGY  PT  +  S  V
Sbjct: 645 EEIYMSLPQGYTPPTGISLPSKPV 668


>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
          Length = 1128

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/76 (63%), Positives = 61/76 (80%)
 Frame = -2

Query: 256 YKARLVARGFTQTEGLDFFETFAPVAKMSTVRVLLYLATISQWSVTQLDVINAFLYGKLE 77
           YKARLVA+G+TQ EGLDFF+T++PVAKM+TVRVLL +A   QW + QLDV NAFL+G L 
Sbjct: 676 YKARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAAAKQWYLHQLDVNNAFLHGDLN 735

Query: 76  EEVYLSIPQGYCLPTE 29
           EEVY+ +P G+  P +
Sbjct: 736 EEVYMQLPLGFSTPND 751


>emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]
          Length = 1083

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/84 (59%), Positives = 64/84 (76%)
 Frame = -2

Query: 256 YKARLVARGFTQTEGLDFFETFAPVAKMSTVRVLLYLATISQWSVTQLDVINAFLYGKLE 77
           YKARLVA+G+ QT GLD+FETF+PV K +T+R++L +A   QW + QLDV NAFL G+LE
Sbjct: 684 YKARLVAKGYNQTHGLDYFETFSPVVKAATIRIILXVALSFQWEIXQLDVHNAFLNGELE 743

Query: 76  EEVYLSIPQGYCLPTEFATYSSSV 5
           E+VY+S P GY L T F T  SS+
Sbjct: 744 EQVYMSQPPGY-LDTTFPTKISSL 766


>emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera]
          Length = 660

 Score =  100 bits (250), Expect = 1e-19
 Identities = 46/76 (60%), Positives = 60/76 (78%)
 Frame = -2

Query: 256 YKARLVARGFTQTEGLDFFETFAPVAKMSTVRVLLYLATISQWSVTQLDVINAFLYGKLE 77
           YKARLVA+G+TQ EGLDFF T++P+AKM+ VRVLL +AT  QW + QL+V NAFL+G L 
Sbjct: 358 YKARLVAKGYTQQEGLDFFNTYSPIAKMTIVRVLLAIATAKQWYLHQLNVNNAFLHGDLN 417

Query: 76  EEVYLSIPQGYCLPTE 29
           EEVY+ +P G+  P +
Sbjct: 418 EEVYMQLPPGFSTPND 433


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