BLASTX nr result

ID: Angelica22_contig00049665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049665
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]    91   7e-17
ref|NP_172899.1| pentatricopeptide repeat-containing protein [Ar...    80   2e-13
ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arab...    74   1e-11
emb|CBI29622.3| unnamed protein product [Vitis vinifera]               71   1e-10

>ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/72 (59%), Positives = 55/72 (76%)
 Frame = -2

Query: 216 YTCLIFDSTHYKNVYVFTNMLKFYSHLDADNDVLTLFDQMSQCGVRPDAFVYPILLKSAG 37
           YT L+F+ST   NV+VFT+ML+FYSHL     V+ +++QM  CGVRPDAFVYPIL+KSAG
Sbjct: 52  YTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG 111

Query: 36  KNGRLLHAHLVK 1
             G   HAH++K
Sbjct: 112 TGGIGFHAHVLK 123


>emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/72 (59%), Positives = 54/72 (75%)
 Frame = -2

Query: 216 YTCLIFDSTHYKNVYVFTNMLKFYSHLDADNDVLTLFDQMSQCGVRPDAFVYPILLKSAG 37
           YT L+F+ST   NV+VFT+ML+FYSHL     V+ +F+ M  CGVRPDAFVYPIL+KSAG
Sbjct: 52  YTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG 111

Query: 36  KNGRLLHAHLVK 1
             G   HAH++K
Sbjct: 112 NGGIGFHAHVLK 123


>ref|NP_172899.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806395|sp|Q9M9R6.2|PPR43_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g14470 gi|332191047|gb|AEE29168.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 540

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/72 (50%), Positives = 52/72 (72%)
 Frame = -2

Query: 216 YTCLIFDSTHYKNVYVFTNMLKFYSHLDADNDVLTLFDQMSQCGVRPDAFVYPILLKSAG 37
           YT LIFDS  + NV+V  +M K++S +D  NDVL L++Q S+CG+ PDAF +P+++KSAG
Sbjct: 58  YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG 117

Query: 36  KNGRLLHAHLVK 1
           + G L  A + K
Sbjct: 118 RFGILFQALVEK 129


>ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arabidopsis lyrata subsp.
           lyrata] gi|297335898|gb|EFH66315.1| hypothetical protein
           ARALYDRAFT_888825 [Arabidopsis lyrata subsp. lyrata]
          Length = 790

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 31/72 (43%), Positives = 49/72 (68%)
 Frame = -2

Query: 216 YTCLIFDSTHYKNVYVFTNMLKFYSHLDADNDVLTLFDQMSQCGVRPDAFVYPILLKSAG 37
           Y  L+FDS  + NV++  +M +++S +D  ND L L++Q S+CG+ PD F +P+++KSAG
Sbjct: 58  YARLVFDSVTFPNVFLVNSMFRYFSQMDMANDALRLYEQRSRCGIMPDTFFFPVVIKSAG 117

Query: 36  KNGRLLHAHLVK 1
           K G L  A + K
Sbjct: 118 KFGVLFQALVEK 129


>emb|CBI29622.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/53 (60%), Positives = 40/53 (75%)
 Frame = -2

Query: 159 MLKFYSHLDADNDVLTLFDQMSQCGVRPDAFVYPILLKSAGKNGRLLHAHLVK 1
           ML+FYSHL     V+ +++QM  CGVRPDAFVYPIL+KSAG  G   HAH++K
Sbjct: 1   MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIGFHAHVLK 53


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