BLASTX nr result

ID: Angelica22_contig00049605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049605
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524665.1| pentatricopeptide repeat-containing protein,...   110   2e-22
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...   108   3e-22
emb|CBI34885.3| unnamed protein product [Vitis vinifera]              108   3e-22
emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]   108   3e-22

>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 2000

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/95 (55%), Positives = 68/95 (71%)
 Frame = -2

Query: 286 MSGAFKTLQTINPTKNLKAYIQTSVSILKDLSQQCSITQGTVLHCHLLKIGISSDNHIAV 107
           M    KTL  INP  + K Y QT VS+LK+L+ Q  I  G+ LH HL K GISS+ +I++
Sbjct: 1   MKNTLKTLLAINPATHFKTYAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISI 60

Query: 106 KLLIMYLKCRKTFKADQIIRDFNGFNLVAHNCLIS 2
           KLLIMYL  RK+ +ADQI +DF+GF+LV HNC+IS
Sbjct: 61  KLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMIS 95


>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/95 (54%), Positives = 69/95 (72%)
 Frame = -2

Query: 286 MSGAFKTLQTINPTKNLKAYIQTSVSILKDLSQQCSITQGTVLHCHLLKIGISSDNHIAV 107
           M+  F+TL  I+P K+ +AY QT VS+LK  S Q  ITQG VLH HL+K G SS  +IA+
Sbjct: 1   MATTFRTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAI 60

Query: 106 KLLIMYLKCRKTFKADQIIRDFNGFNLVAHNCLIS 2
           KLLI+YL CRK  + DQI+++F+G +LV  NC+IS
Sbjct: 61  KLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMIS 95


>emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/95 (54%), Positives = 69/95 (72%)
 Frame = -2

Query: 286 MSGAFKTLQTINPTKNLKAYIQTSVSILKDLSQQCSITQGTVLHCHLLKIGISSDNHIAV 107
           M+  F+TL  I+P K+ +AY QT VS+LK  S Q  ITQG VLH HL+K G SS  +IA+
Sbjct: 1   MATTFRTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAI 60

Query: 106 KLLIMYLKCRKTFKADQIIRDFNGFNLVAHNCLIS 2
           KLLI+YL CRK  + DQI+++F+G +LV  NC+IS
Sbjct: 61  KLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMIS 95


>emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/95 (54%), Positives = 69/95 (72%)
 Frame = -2

Query: 286 MSGAFKTLQTINPTKNLKAYIQTSVSILKDLSQQCSITQGTVLHCHLLKIGISSDNHIAV 107
           M+  F+TL  I+P K+ +AY QT VS+LK  S Q  ITQG VLH HL+K G SS  +IA+
Sbjct: 1   MATTFRTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAI 60

Query: 106 KLLIMYLKCRKTFKADQIIRDFNGFNLVAHNCLIS 2
           KLLI+YL CRK  + DQI+++F+G +LV  NC+IS
Sbjct: 61  KLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMIS 95


Top