BLASTX nr result

ID: Angelica22_contig00049487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049487
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616995.1| F-box protein [Medicago truncatula] gi|35551...    62   6e-08
gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]    59   3e-07
emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]    59   4e-07
ref|XP_002310934.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
gb|ABR18787.1| class S F-box protein [Nicotiana alata]                 57   2e-06

>ref|XP_003616995.1| F-box protein [Medicago truncatula] gi|355518330|gb|AES99953.1|
           F-box protein [Medicago truncatula]
          Length = 239

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
 Frame = +3

Query: 21  LSQQDKEMRG-RFVALWNPAINRWKLIRVPGLKSDCDRLYALTVGLGFDQAADDYKIVR- 194
           +  Q  E  G R V LWNP  N ++L+ +P  K+   +L+A    +G+D   DDYK++R 
Sbjct: 1   MMDQKSEFYGKRRVVLWNPTTNEFRLLPLPE-KNPAWKLFADHYQIGYDHIKDDYKMIRC 59

Query: 195 ------IVPVVREPDFQEHCWSRVEIYSANSNSWREV 287
                 IVP+   P   EH W   E+YS NSNSW+++
Sbjct: 60  TRYSPKIVPIYHVP--SEHLW---EMYSLNSNSWKKI 91


>gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 372

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/95 (35%), Positives = 49/95 (51%)
 Frame = +3

Query: 3   INGIICLSQQDKEMRGRFVALWNPAINRWKLIRVPGLKSDCDRLYALTVGLGFDQAADDY 182
           +NG+ICL  + +E       LWNPA+ + K +   G K      Y L  G G+D+  DDY
Sbjct: 110 VNGLICLYSKIEE-----TVLWNPAVKKSKKLPTLGAKLRNGCSYYLKYGFGYDETRDDY 164

Query: 183 KIVRIVPVVREPDFQEHCWSRVEIYSANSNSWREV 287
           K+V I  +  +      C S V IYS  ++SWR +
Sbjct: 165 KVVVIQCIYED---SGSCDSVVNIYSLKADSWRTI 196


>emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]
          Length = 265

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/94 (35%), Positives = 52/94 (55%)
 Frame = +3

Query: 6   NGIICLSQQDKEMRGRFVALWNPAINRWKLIRVPGLKSDCDRLYALTVGLGFDQAADDYK 185
           NG++C+S +D E    FV  WNP+I   K  R+P    +    Y ++   G+D   DDYK
Sbjct: 106 NGLVCISIRDMEKDTIFV--WNPSIKESK--RLPSKPFE-QLFYLVSYAFGYDSITDDYK 160

Query: 186 IVRIVPVVREPDFQEHCWSRVEIYSANSNSWREV 287
           +VR+V       ++ H    VE++S  SN+WR++
Sbjct: 161 VVRLVCCSINDSYEYH----VEVFSLRSNAWRKI 190


>ref|XP_002310934.1| predicted protein [Populus trichocarpa] gi|222850754|gb|EEE88301.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
 Frame = +3

Query: 6   NGIICLSQQDKEMRG-RFVALWNPAINRWKLIRVPGLKSDCDRLYALTVGLGFDQAADDY 182
           NG++CL  +  E  G R + LWNP+I   K +R+P  +S    +  L +GLG+D  +DDY
Sbjct: 102 NGVVCLRGRYPEFDGSRRLILWNPSIK--KTLRLPPPRSFASTVPTL-LGLGYDPRSDDY 158

Query: 183 KIVRIVPVVREPDFQEHCWSRVEIYSANSNSWREVVD 293
           K+ RI   VR  +  EH +   + +S NS SW E VD
Sbjct: 159 KVPRI---VRLGNSAEHPFV-FQFFSLNSGSWNENVD 191


>gb|ABR18787.1| class S F-box protein [Nicotiana alata]
          Length = 392

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
 Frame = +3

Query: 6   NGIICLSQQDKEMRGRFVALWNPAINR-WKLIRV-----PGLKSDCDRLY--ALTVGLGF 161
           NGI+C+         R + L+NP +   W+L        P L SD    Y   +T+G+GF
Sbjct: 116 NGIVCIGSY------RGIVLYNPTLREFWELPPSILPPPPYLSSDKKLNYWMDMTMGIGF 169

Query: 162 DQAADDYKIVRIVPVVRE---PDFQEHC--WSRVEIYSANSNSWREVVD 293
           D   +DYK+VRI+    E    DF  H    S+VE+Y+ ++NSWR + D
Sbjct: 170 DPNTNDYKVVRILRPAHEYTFEDFDNHIRDVSKVEVYNLSTNSWRRIKD 218


Top