BLASTX nr result

ID: Angelica22_contig00049467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049467
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   106   2e-21
emb|CBI22269.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21

>ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 561

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/82 (65%), Positives = 64/82 (78%)
 Frame = +2

Query: 2   SELHKCNNLNQLKQLHALIYRSYLHQDPFISPKLITSYSNCRQMVSAISVFNQVQTPNVH 181
           S+LHKC NLNQ+KQLHA I +S LH D F+ PKLI+++S CRQM+ A + FNQVQ PNVH
Sbjct: 51  SDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVH 110

Query: 182 LYNTMIKAHIRNSQSLQAFDVF 247
           LYNTMI+AH  NSQ  QAF  F
Sbjct: 111 LYNTMIRAHSHNSQPSQAFATF 132


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/82 (65%), Positives = 64/82 (78%)
 Frame = +2

Query: 2   SELHKCNNLNQLKQLHALIYRSYLHQDPFISPKLITSYSNCRQMVSAISVFNQVQTPNVH 181
           S+LHKC NLNQ+KQLHA I +S LH D F+ PKLI+++S CRQM+ A + FNQVQ PNVH
Sbjct: 25  SDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVH 84

Query: 182 LYNTMIKAHIRNSQSLQAFDVF 247
           LYNTMI+AH  NSQ  QAF  F
Sbjct: 85  LYNTMIRAHSHNSQPSQAFATF 106


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  106 bits (264), Expect = 2e-21
 Identities = 45/81 (55%), Positives = 65/81 (80%)
 Frame = +2

Query: 5   ELHKCNNLNQLKQLHALIYRSYLHQDPFISPKLITSYSNCRQMVSAISVFNQVQTPNVHL 184
           +LHKC + N +K++HA I +  LH D +++PKLI+++S C QM  A++VFNQ+Q PNVHL
Sbjct: 29  DLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHL 88

Query: 185 YNTMIKAHIRNSQSLQAFDVF 247
           YNT+I+AH++NSQSL+AF  F
Sbjct: 89  YNTLIRAHVQNSQSLKAFATF 109


>emb|CBI22269.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  105 bits (262), Expect = 4e-21
 Identities = 45/82 (54%), Positives = 67/82 (81%)
 Frame = +2

Query: 2   SELHKCNNLNQLKQLHALIYRSYLHQDPFISPKLITSYSNCRQMVSAISVFNQVQTPNVH 181
           S+LH+C++LNQ+KQ+HA + ++ LH++ F+  KLI ++S CRQM  A++VFNQ+Q P+V 
Sbjct: 22  SDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVL 81

Query: 182 LYNTMIKAHIRNSQSLQAFDVF 247
           LYNT+I+AH+RNS+ L AF VF
Sbjct: 82  LYNTLIRAHVRNSEPLLAFSVF 103


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  105 bits (262), Expect = 4e-21
 Identities = 45/82 (54%), Positives = 67/82 (81%)
 Frame = +2

Query: 2   SELHKCNNLNQLKQLHALIYRSYLHQDPFISPKLITSYSNCRQMVSAISVFNQVQTPNVH 181
           S+LH+C++LNQ+KQ+HA + ++ LH++ F+  KLI ++S CRQM  A++VFNQ+Q P+V 
Sbjct: 22  SDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVL 81

Query: 182 LYNTMIKAHIRNSQSLQAFDVF 247
           LYNT+I+AH+RNS+ L AF VF
Sbjct: 82  LYNTLIRAHVRNSEPLLAFSVF 103


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