BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049413
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_063999.1| orf100a gene product (mitochondrion) [Beta vulg...    71   1e-10
gb|AAT40486.1| putative polyprotein [Solanum demissum]                 68   9e-10
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...    67   2e-09
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...    67   2e-09
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]    66   3e-09

>ref|NP_063999.1| orf100a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435156|ref|YP_004222374.1| hypothetical
           protein BevumaM_p141 [Beta vulgaris subsp. maritima]
           gi|346683248|ref|YP_004842180.1| hypothetical protein
           BemaM_p136 [Beta macrocarpa] gi|9049301|dbj|BAA99311.1|
           orf100a [Beta vulgaris subsp. vulgaris]
           gi|317905607|emb|CBJ14013.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439889|emb|CBJ17589.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148044|emb|CBJ20707.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500166|emb|CBX24985.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977908|emb|CBL54132.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 100

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/75 (41%), Positives = 50/75 (66%)
 Frame = +2

Query: 110 ASWIIDTGASDHMAFNSMLFSDIHDTPSPITICLPNGTLMLVDKIVNVMLTSNIVLHNVL 289
           ++W+ID+GASDH   N  + S++      I + LP+G++  V+++ NV ++ N+ L  VL
Sbjct: 10  SAWLIDSGASDHFTGNKEIMSNVRTLRKEIRVGLPDGSVKTVNEVGNVKISPNVTLTGVL 69

Query: 290 YVPDFKHNILYVGKI 334
           YV DFKHN+L V K+
Sbjct: 70  YVNDFKHNLLSVSKL 84


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/73 (45%), Positives = 49/73 (67%)
 Frame = +2

Query: 116 WIIDTGASDHMAFNSMLFSDIHDTPSPITICLPNGTLMLVDKIVNVMLTSNIVLHNVLYV 295
           WI+DTGAS HM+ ++ LF+D+ D P P  + LPNG+  +    + V+LT  + LH+VLYV
Sbjct: 334 WIVDTGASHHMSGDAQLFNDLCDVP-PYLVSLPNGSTTIASMEI-VILTDKMKLHHVLYV 391

Query: 296 PDFKHNILYVGKI 334
           P  K N++ V K+
Sbjct: 392 PQLKCNLIVVSKL 404


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/74 (41%), Positives = 49/74 (66%)
 Frame = +2

Query: 104 TSASWIIDTGASDHMAFNSMLFSDIHDTPSPITICLPNGTLMLVDKIVNVMLTSNIVLHN 283
           +S +WIID+GAS H+  +  +F ++    S +T+ LPNGT + +     + +TS ++LHN
Sbjct: 393 SSDAWIIDSGASSHVCSDLTMFRELIHV-SGVTVTLPNGTRVAITHTGTICITSTLILHN 451

Query: 284 VLYVPDFKHNILYV 325
           VL VPDFK N++ V
Sbjct: 452 VLLVPDFKFNLISV 465


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
           gi|7267797|emb|CAB81200.1| putative retrotransposon
           polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/74 (41%), Positives = 49/74 (66%)
 Frame = +2

Query: 104 TSASWIIDTGASDHMAFNSMLFSDIHDTPSPITICLPNGTLMLVDKIVNVMLTSNIVLHN 283
           +S +WIID+GAS H+  +  +F ++    S +T+ LPNGT + +     + +TS ++LHN
Sbjct: 95  SSDAWIIDSGASSHVCSDLTMFRELIHV-SGVTVTLPNGTRVAITHTGTICITSTLILHN 153

Query: 284 VLYVPDFKHNILYV 325
           VL VPDFK N++ V
Sbjct: 154 VLLVPDFKFNLISV 167


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/104 (37%), Positives = 60/104 (57%)
 Frame = +2

Query: 23  SDNLQHSSVNFAGIVSAFQVDLVDTHNTSASWIIDTGASDHMAFNSMLFSDIHDTPSPIT 202
           S+ LQ S  NF GI+S        T N S  WI+D+GA+ H+  NS +F  IH   S  T
Sbjct: 346 SNPLQQSISNFTGILSLSPSS--STLNPSI-WILDSGATHHVCTNSSMFHSIHSFSSN-T 401

Query: 203 ICLPNGTLMLVDKIVNVMLTSNIVLHNVLYVPDFKHNILYVGKI 334
           + LP GT + +  I  + L+ ++VL +VLY+P F+ N++ +  +
Sbjct: 402 VTLPTGTKIPITGIGTIHLSPHLVLEHVLYIPTFQFNLISISAL 445