BLASTX nr result

ID: Angelica22_contig00049387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049387
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    57   2e-06
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    55   6e-06

>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/96 (37%), Positives = 54/96 (56%)
 Frame = +2

Query: 2   TVRPVAYSKSRRDVLVEVVDEKVMWYNLERKKVRPVNITNMPDVFHDLEVYTESLVPPDY 181
           +++P+AYSKS  +VL+E  +  + WY+L+RK+V  V I  +P  F + E+   SLVP   
Sbjct: 299 SLKPLAYSKSGNEVLIEHDNVNLFWYDLKRKEVVNVWIQGVPITF-EAEICVGSLVP--- 354

Query: 182 KFSCDGXXXXXXXXXXXXXXRNERDRFLSKGFKLVL 289
             + +               R +RD FLS+GFKLVL
Sbjct: 355 -LNANRLRRRPKHEHKETKNRKKRDDFLSEGFKLVL 389


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/96 (37%), Positives = 55/96 (57%)
 Frame = +2

Query: 2   TVRPVAYSKSRRDVLVEVVDEKVMWYNLERKKVRPVNITNMPDVFHDLEVYTESLVPPDY 181
           +++P+AYSKS  +VL+E  +  + WY+L+RK+V+   I  +P  F + + + ESL+    
Sbjct: 306 SLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKN-RIPGIPYSF-EADTFVESLISVSP 363

Query: 182 KFSCDGXXXXXXXXXXXXXXRNERDRFLSKGFKLVL 289
               DG              RN+RD FLS+GFKLVL
Sbjct: 364 NRHLDG---RTQDDDEDSKDRNKRDDFLSEGFKLVL 396


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