BLASTX nr result

ID: Angelica22_contig00049320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049320
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006732333.1| capsid protein [Dahlia mosaic virus] gi|3132...    82   5e-14
gb|ABM97615.1| putative capsid protein [Dahlia mosaic virus]           81   1e-13
gb|AAX89138.1| putative capsid protein [Dahlia mosaic virus]           79   4e-13
gb|AEL30040.1| capsid protein [Dahlia common mosaic virus]             69   3e-10
gb|ABW81762.1| coat protein [Dahlia mosaic virus-Holland]              69   3e-10

>ref|YP_006732333.1| capsid protein [Dahlia mosaic virus] gi|31323288|gb|AAP44110.1|
           putative capsid protein [Dahlia mosaic virus]
           gi|404435873|gb|AFR69282.1| capsid protein [Dahlia
           mosaic virus]
          Length = 491

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 33/72 (45%), Positives = 55/72 (76%)
 Frame = +1

Query: 1   YIRKISLVGDKAMTKFLEERSVLTQHSLAFAQKIVKNEITRYCDDARTQKQLKTFGKKCY 180
           Y+RKI ++G +A  ++ +E ++ ++HS+AFA +IVK+EI +YCD  +T KQLK+FG++C 
Sbjct: 299 YLRKIPIIGQQARNRWEKEATIPSKHSIAFATRIVKDEIAKYCDFRKTSKQLKSFGQRCC 358

Query: 181 SKLNKENYNFGC 216
           ++  + NYN GC
Sbjct: 359 NQYKEPNYNIGC 370


>gb|ABM97615.1| putative capsid protein [Dahlia mosaic virus]
          Length = 433

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 33/72 (45%), Positives = 55/72 (76%)
 Frame = +1

Query: 1   YIRKISLVGDKAMTKFLEERSVLTQHSLAFAQKIVKNEITRYCDDARTQKQLKTFGKKCY 180
           Y+RKI ++G +A  ++ +E ++ ++HS+AFA +IVK+EI +YCD  +T KQLK+FG++C 
Sbjct: 299 YLRKIPIIGQQARDRWEKEATMPSKHSIAFATRIVKDEIAKYCDFRKTSKQLKSFGQRCC 358

Query: 181 SKLNKENYNFGC 216
           ++  + NYN GC
Sbjct: 359 NQYKEPNYNIGC 370


>gb|AAX89138.1| putative capsid protein [Dahlia mosaic virus]
          Length = 107

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 32/72 (44%), Positives = 54/72 (75%)
 Frame = +1

Query: 1   YIRKISLVGDKAMTKFLEERSVLTQHSLAFAQKIVKNEITRYCDDARTQKQLKTFGKKCY 180
           Y+RKI ++G +A  ++ +E ++ ++HS+AFA +IVK+EI +YCD  +T KQLK+FG++C 
Sbjct: 18  YLRKIPIIGQQARDRWEKEATIPSKHSIAFATRIVKDEIAKYCDFRKTSKQLKSFGQRCC 77

Query: 181 SKLNKENYNFGC 216
            +  + N+N GC
Sbjct: 78  YQYKEPNFNIGC 89


>gb|AEL30040.1| capsid protein [Dahlia common mosaic virus]
          Length = 505

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/72 (45%), Positives = 47/72 (65%)
 Frame = +1

Query: 1   YIRKISLVGDKAMTKFLEERSVLTQHSLAFAQKIVKNEITRYCDDARTQKQLKTFGKKCY 180
           Y+RKI +VG+ A  ++ +E S   ++S+A+A ++VK EI RYCD   T KQLK F K C 
Sbjct: 308 YLRKIPVVGNHAWEEWKKEPSNPLKYSIAYATRLVKKEIARYCDFKNTTKQLKKFRKNCC 367

Query: 181 SKLNKENYNFGC 216
           +K  + NY  GC
Sbjct: 368 NKYKEPNYLIGC 379


>gb|ABW81762.1| coat protein [Dahlia mosaic virus-Holland]
          Length = 505

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/72 (45%), Positives = 47/72 (65%)
 Frame = +1

Query: 1   YIRKISLVGDKAMTKFLEERSVLTQHSLAFAQKIVKNEITRYCDDARTQKQLKTFGKKCY 180
           Y+RKI +VG+ A  ++ +E S   ++S+A+A ++VK EI RYCD   T KQLK F K C 
Sbjct: 308 YLRKIPVVGNHAWEEWKKEPSNPLKYSIAYATRLVKKEIARYCDFKNTTKQLKKFRKNCC 367

Query: 181 SKLNKENYNFGC 216
           +K  + NY  GC
Sbjct: 368 NKYKEPNYLIGC 379


Top