BLASTX nr result

ID: Angelica22_contig00049264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049264
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago t...   154   4e-40
ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat...   144   5e-38
emb|CBI18084.3| unnamed protein product [Vitis vinifera]              153   2e-35

>ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355486292|gb|AES67495.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 678

 Score =  154 bits (390), Expect(2) = 4e-40
 Identities = 71/94 (75%), Positives = 83/94 (88%)
 Frame = +3

Query: 60  KHRSTMNERGIQKIPAYSWIEVDGNVHEFLVGDTSHPLSENIYAKLDDITEELKAAGYIP 239
           K RST+NE+G+QK+P YSW+EVDG VHEFLVGDTSHPLS+ IY KL+ + ++LK AGY P
Sbjct: 530 KIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNP 589

Query: 240 TTEFVLFDIEEEEKAHFLGCHSEKLAIAFGLIST 341
           TTEFVLFD+EEEEK HFLGCHSEKLA+AF LIST
Sbjct: 590 TTEFVLFDVEEEEKEHFLGCHSEKLAVAFALIST 623



 Score = 35.0 bits (79), Expect(2) = 4e-40
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +1

Query: 1   GNYVLLSNIFSANHKWDDAVNI 66
           G+YVLLSNI+SA+ +WD+A  I
Sbjct: 510 GHYVLLSNIYSASRRWDEAEKI 531


>ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|222855145|gb|EEE92692.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  165 bits (417), Expect = 4e-39
 Identities = 76/98 (77%), Positives = 89/98 (90%)
 Frame = +3

Query: 57  SKHRSTMNERGIQKIPAYSWIEVDGNVHEFLVGDTSHPLSENIYAKLDDITEELKAAGYI 236
           +K RS M+ERGI+K+P YSWIEVDG VHEFLVGDTSHPLSE IYAKL ++ ++LKA+GY+
Sbjct: 470 AKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYV 529

Query: 237 PTTEFVLFDIEEEEKAHFLGCHSEKLAIAFGLISTKPN 350
           PTT++VLFDIEEEEK HF+GCHSEKLAIAFGLIST PN
Sbjct: 530 PTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPN 567


>ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|222868275|gb|EEF05406.1|
           predicted protein [Populus trichocarpa]
          Length = 682

 Score =  163 bits (412), Expect = 2e-38
 Identities = 75/98 (76%), Positives = 88/98 (89%)
 Frame = +3

Query: 57  SKHRSTMNERGIQKIPAYSWIEVDGNVHEFLVGDTSHPLSENIYAKLDDITEELKAAGYI 236
           +K RS M+ERG++KIP YSWIEVDG VH+FLVGDTSHPLSE IYAKL ++ ++LKAAGY+
Sbjct: 533 AKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYV 592

Query: 237 PTTEFVLFDIEEEEKAHFLGCHSEKLAIAFGLISTKPN 350
           PTT+ VLFDIEEEEK HF+GCHSEKLA+AFGLIST PN
Sbjct: 593 PTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPN 630


>ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  144 bits (364), Expect(2) = 5e-38
 Identities = 66/94 (70%), Positives = 81/94 (86%)
 Frame = +3

Query: 60  KHRSTMNERGIQKIPAYSWIEVDGNVHEFLVGDTSHPLSENIYAKLDDITEELKAAGYIP 239
           K RS++N++G+QK+P  SW+EVDG VHEFLVGDTSHPLS  IY KL+ + ++L+ AGY P
Sbjct: 528 KIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNP 587

Query: 240 TTEFVLFDIEEEEKAHFLGCHSEKLAIAFGLIST 341
           TTEFVLFD+EEEEK +FLGCHSEKLA+AF LIST
Sbjct: 588 TTEFVLFDVEEEEKEYFLGCHSEKLAVAFALIST 621



 Score = 38.1 bits (87), Expect(2) = 5e-38
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = +1

Query: 1   GNYVLLSNIFSANHKWDDAVNI 66
           G+YVLLSNI+SA+H+WD+A  I
Sbjct: 508 GHYVLLSNIYSASHRWDEAEKI 529


>emb|CBI18084.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/97 (75%), Positives = 83/97 (85%)
 Frame = +3

Query: 57  SKHRSTMNERGIQKIPAYSWIEVDGNVHEFLVGDTSHPLSENIYAKLDDITEELKAAGYI 236
           +K R +MNE+ IQK P  SWIEVDG VHEFLVGD  HPLSE IYAKLD++T+++K AGY+
Sbjct: 347 AKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYV 406

Query: 237 PTTEFVLFDIEEEEKAHFLGCHSEKLAIAFGLISTKP 347
           PTT+FVLFDIEEEEK HFLGCHSEKLAIAFGLIS  P
Sbjct: 407 PTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATP 443


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