BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049189
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867315.1| pentatricopeptide repeat-containing protein ...   129   2e-28
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ...   122   3e-26
gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]   122   3e-26
sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-c...   120   1e-25

>ref|XP_002867315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313151|gb|EFH43574.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/119 (50%), Positives = 93/119 (78%), Gaps = 1/119 (0%)
 Frame = -1

Query: 355 VSWNAMLNCFIQNGCGLKAVEMFRKMYALGFVPKAELLASLLSVCVRIGCVD-IAREIHA 179
           VS+ +++NC+ Q+G   +A+++ ++MY  GFVPK+EL+ASLL++C R+G    +AR +HA
Sbjct: 114 VSYCSIVNCYCQDGLLSEAMKLLKEMYFYGFVPKSELVASLLALCTRMGSSSKVARMLHA 173

Query: 178 IVVVDERIEETLFLSTALVHLYWRCGKPMLAFYIFDKMEVRTEVSWTAMIPGCAAYHNY 2
           +V+VDERI+E++ LSTAL+ +Y +   P  AF++FD+ME++ EVSWTAMI GC A +NY
Sbjct: 174 LVLVDERIQESVLLSTALLDMYLKFDDPAAAFHVFDQMELKNEVSWTAMISGCVANYNY 232


>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/118 (50%), Positives = 85/118 (72%)
 Frame = -1

Query: 355 VSWNAMLNCFIQNGCGLKAVEMFRKMYALGFVPKAELLASLLSVCVRIGCVDIAREIHAI 176
           ++WN+++N ++ NG   +A+E    +Y LG VPK ELLAS++S+C R     I R+IHA+
Sbjct: 118 ITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHAL 177

Query: 175 VVVDERIEETLFLSTALVHLYWRCGKPMLAFYIFDKMEVRTEVSWTAMIPGCAAYHNY 2
           VVV+ERI +++FLSTALV  Y+RCG  ++A  +FD MEV+  VSWT MI GC A+ +Y
Sbjct: 178 VVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDY 235



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
 Frame = -1

Query: 355 VSWNAMLNCFIQNGCGLKAVEMFRKMYALGFVPKAELLASLLSVCVRIGCVDIAREIHAI 176
           VSW  M++  I +    +A   FR M A G  P      +LLS C   G V   +EIH  
Sbjct: 220 VSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHG- 278

Query: 175 VVVDERIEETLFLSTALVHLYWRCGKPM-LAFYIFDKMEVRTEVSWTAMI 29
                  E     S+ALV++Y +CG+PM LA  IF+    R  V W+++I
Sbjct: 279 YAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSII 328


>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482334|gb|AES63537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 622

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/122 (49%), Positives = 89/122 (72%), Gaps = 4/122 (3%)
 Frame = -1

Query: 355 VSWNAMLNCFIQNGCGLKAVEMFRKMYALGFVPKAELLASLLSVCVRIGCVD--IAREIH 182
           ++WN+M+N ++QNG  ++A++M +  Y LGF+PK ELLAS++S+C R   +   I R+IH
Sbjct: 133 ITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIH 192

Query: 181 AIVVVDERI--EETLFLSTALVHLYWRCGKPMLAFYIFDKMEVRTEVSWTAMIPGCAAYH 8
            +VVVD RI  + ++FLSTA V  Y+RCG  ++A  +FD+MEV+ EVSWTA+I GCA   
Sbjct: 193 GLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQ 252

Query: 7   NY 2
           +Y
Sbjct: 253 DY 254


>gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 460

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/122 (49%), Positives = 89/122 (72%), Gaps = 4/122 (3%)
 Frame = -1

Query: 355 VSWNAMLNCFIQNGCGLKAVEMFRKMYALGFVPKAELLASLLSVCVRIGCVD--IAREIH 182
           ++WN+M+N ++QNG  ++A++M +  Y LGF+PK ELLAS++S+C R   +   I R+IH
Sbjct: 133 ITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIH 192

Query: 181 AIVVVDERI--EETLFLSTALVHLYWRCGKPMLAFYIFDKMEVRTEVSWTAMIPGCAAYH 8
            +VVVD RI  + ++FLSTA V  Y+RCG  ++A  +FD+MEV+ EVSWTA+I GCA   
Sbjct: 193 GLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQ 252

Query: 7   NY 2
           +Y
Sbjct: 253 DY 254


>sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31070, mitochondrial; Flags: Precursor
          Length = 624

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/119 (48%), Positives = 88/119 (73%), Gaps = 1/119 (0%)
 Frame = -1

Query: 355 VSWNAMLNCFIQNGCGLKAVEMFRKMYALGFVPKAELLASLLSVCVRIGCVD-IAREIHA 179
           VS+ +++N   Q+G   +A+++ ++MY  GF+PK+EL+ASLL++C R+G    +AR  HA
Sbjct: 125 VSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHA 184

Query: 178 IVVVDERIEETLFLSTALVHLYWRCGKPMLAFYIFDKMEVRTEVSWTAMIPGCAAYHNY 2
           +V+VDER++E++ LSTALV +Y +      AF++FD+MEV+ EVSWTAMI GC A  NY
Sbjct: 185 LVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNY 243



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
 Frame = -1

Query: 355 VSWNAMLNCFIQNGCGLKAVEMFRKMYALGFVPKAELLASLLSVCVRIGC-VDIAREIHA 179
           VSW AM++  + N      V++FR M      P    L S+L  CV +     + +EIH 
Sbjct: 228 VSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHG 287

Query: 178 IVV-----VDERIEETLFLSTALVHLYWRCGKPMLAFYIFDKMEVRTEVSWTAMIPGCA 17
                    DER      L+ A + +Y RCG   L+  +F+  +VR  V W++MI G A
Sbjct: 288 FSFRHGCHADER------LTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYA 340