BLASTX nr result

ID: Angelica22_contig00049157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049157
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   152   2e-35
ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat...   145   3e-33
ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat...   145   3e-33
ref|XP_003624159.1| Pentatricopeptide repeat-containing protein ...   128   4e-28
dbj|BAK00500.1| predicted protein [Hordeum vulgare subsp. vulgare]    116   2e-24

>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/107 (68%), Positives = 86/107 (80%)
 Frame = -2

Query: 322  KNIEMARWVSTKLFELEPPTAGSYILLSSTCASGDKWDDVAQVRGLMKDMGVKKHPGRSW 143
            KNIEM  WV  KL ELEP  AG YIL SS CA+  +W++ A++R LM+  GVKK+P +SW
Sbjct: 819  KNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSW 878

Query: 142  IQLKNQVHSFVMGDRSHPEEAAIYSYLDELIRRLKEIGYSTEVSIVM 2
            IQLKNQVHSFVMGDRSHP++  IYSYLDELI RLKEIGYST+V+ VM
Sbjct: 879  IQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVM 925


>ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/107 (61%), Positives = 84/107 (78%)
 Frame = -2

Query: 322  KNIEMARWVSTKLFELEPPTAGSYILLSSTCASGDKWDDVAQVRGLMKDMGVKKHPGRSW 143
            KN+EM +WVS  L ++ P   G+Y+LLS+ CAS  +WD+ A+VR LM   GVKK PG+SW
Sbjct: 822  KNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSW 881

Query: 142  IQLKNQVHSFVMGDRSHPEEAAIYSYLDELIRRLKEIGYSTEVSIVM 2
            IQLK+Q+H+FVMGDRSHP++  IYSYLD LI RLKEIGYS +V +VM
Sbjct: 882  IQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVM 928


>ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  145 bits (366), Expect = 3e-33
 Identities = 64/107 (59%), Positives = 84/107 (78%)
 Frame = -2

Query: 322  KNIEMARWVSTKLFELEPPTAGSYILLSSTCASGDKWDDVAQVRGLMKDMGVKKHPGRSW 143
            KN+EM +WVS  L ++ P   G+Y+LLS+ CAS  +WD+ A+VR LM   G+KK PG+SW
Sbjct: 822  KNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSW 881

Query: 142  IQLKNQVHSFVMGDRSHPEEAAIYSYLDELIRRLKEIGYSTEVSIVM 2
            IQLK+Q+H+F+MGDRSHP++  IYSYLD LI RLKEIGYS +V +VM
Sbjct: 882  IQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVM 928


>ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87162577|gb|ABD28372.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499174|gb|AES80377.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/107 (56%), Positives = 76/107 (71%)
 Frame = -2

Query: 322 KNIEMARWVSTKLFELEPPTAGSYILLSSTCASGDKWDDVAQVRGLMKDMGVKKHPGRSW 143
           KN  M + VS  L +  P    +YILLS+ C+S  +WD+ A VR LM   GVKK PG+SW
Sbjct: 566 KNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSW 625

Query: 142 IQLKNQVHSFVMGDRSHPEEAAIYSYLDELIRRLKEIGYSTEVSIVM 2
           +QLK+Q+HSF +GDRSHP++  IYSYLD LI RLKEIGYS +  +VM
Sbjct: 626 VQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVM 672


>dbj|BAK00500.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 688

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/106 (49%), Positives = 77/106 (72%)
 Frame = -2

Query: 322 KNIEMARWVSTKLFELEPPTAGSYILLSSTCASGDKWDDVAQVRGLMKDMGVKKHPGRSW 143
           K++E A+  S  L +LE   AGSY++LS+  A+  KW D +++R LM + GV+K PGRSW
Sbjct: 502 KDMEHAKLASESLIQLEQCDAGSYVMLSNMYATHSKWRDTSKLRSLMLERGVRKQPGRSW 561

Query: 142 IQLKNQVHSFVMGDRSHPEEAAIYSYLDELIRRLKEIGYSTEVSIV 5
           I LKN VH+FV GD +HP  + IY+YL++L+ RLKE+GY++ + +V
Sbjct: 562 IHLKNTVHTFVAGDAAHPRSSEIYTYLEKLMERLKELGYTSRIDLV 607


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