BLASTX nr result

ID: Angelica22_contig00049149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049149
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_588300.1| hypothetical protein ZeamMp038 [Zea mays subsp....    57   1e-06
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              57   2e-06

>ref|YP_588300.1| hypothetical protein ZeamMp038 [Zea mays subsp. mays]
           gi|40795086|gb|AAR91130.1| hypothetical protein
           (mitochondrion) [Zea mays]
          Length = 117

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/47 (57%), Positives = 36/47 (76%)
 Frame = -3

Query: 142 VISFSNADFEGVDPSHNEALVVILDIADNEVKRVLVDNGSSVNILFK 2
           VISFS+ D EG+   H++A+V++L I  N VKRVLVD GSS +IL+K
Sbjct: 19  VISFSDQDSEGIQRPHDDAIVLVLKIGGNRVKRVLVDTGSSADILYK 65


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/53 (54%), Positives = 39/53 (73%)
 Frame = -3

Query: 160 QSIPEQVISFSNADFEGVDPSHNEALVVILDIADNEVKRVLVDNGSSVNILFK 2
           QS P   ISF++ D EG+D  HN+ LVV L I+D+ V RVL+D GSSV+++FK
Sbjct: 596 QSAP---ISFTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFK 645


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