BLASTX nr result

ID: Angelica22_contig00049109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049109
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi...    68   7e-10
gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]                          65   6e-09
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar...    65   6e-09
ref|XP_002874971.1| pentatricopeptide repeat-containing protein ...    65   8e-09
ref|XP_002334407.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08

>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
           gi|449523383|ref|XP_004168703.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
          Length = 803

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/67 (56%), Positives = 52/67 (77%)
 Frame = -3

Query: 257 LLDAFIRCGKFNSALKILDYYENDLEMKTTTGHLNLDIYNSVLIALVRNDQLDLALTIFF 78
           LLDAFIR GK+++AL+ILD+ E   ++ T+   L L+ YNSVL+AL+R +Q+ LAL+IFF
Sbjct: 131 LLDAFIRSGKYDAALEILDHME---DLGTS---LELNTYNSVLVALLRKNQVGLALSIFF 184

Query: 77  KLLDASN 57
           KLLD  N
Sbjct: 185 KLLDGFN 191


>gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]
          Length = 508

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/72 (52%), Positives = 49/72 (68%)
 Frame = -3

Query: 257 LLDAFIRCGKFNSALKILDYYENDLEMKTTTGHLNLDIYNSVLIALVRNDQLDLALTIFF 78
           LLD+ IR GKF SAL +LDY      M+     LN  +Y+SVLIALV+  +L LAL+I F
Sbjct: 133 LLDSLIRSGKFESALGVLDY------MEELGDCLNPSVYDSVLIALVKKHELRLALSILF 186

Query: 77  KLLDASNVNSSD 42
           KLL+AS+ +S D
Sbjct: 187 KLLEASDNHSDD 198


>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
           [Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
           At4g01570/T15B16_21 [Arabidopsis thaliana]
           gi|332656643|gb|AEE82043.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 805

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/72 (52%), Positives = 49/72 (68%)
 Frame = -3

Query: 257 LLDAFIRCGKFNSALKILDYYENDLEMKTTTGHLNLDIYNSVLIALVRNDQLDLALTIFF 78
           LLD+ IR GKF SAL +LDY      M+     LN  +Y+SVLIALV+  +L LAL+I F
Sbjct: 133 LLDSLIRSGKFESALGVLDY------MEELGDCLNPSVYDSVLIALVKKHELRLALSILF 186

Query: 77  KLLDASNVNSSD 42
           KLL+AS+ +S D
Sbjct: 187 KLLEASDNHSDD 198


>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320808|gb|EFH51230.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 802

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = -3

Query: 257 LLDAFIRCGKFNSALKILDYYENDLEMKTTTGHLNLDIYNSVLIALVRNDQLDLALTIFF 78
           LLD+ IR GKF SAL +LDY      M+     LN  +Y+SVLIAL + ++L LAL+IFF
Sbjct: 133 LLDSLIRSGKFESALGVLDY------MEELGDCLNPSLYDSVLIALAKKNELRLALSIFF 186

Query: 77  KLLDASNVNSSD 42
           KLL+AS+ +  D
Sbjct: 187 KLLEASDNHGDD 198


>ref|XP_002334407.1| predicted protein [Populus trichocarpa] gi|222872045|gb|EEF09176.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/72 (47%), Positives = 50/72 (69%)
 Frame = -3

Query: 257 LLDAFIRCGKFNSALKILDYYENDLEMKTTTGHLNLDIYNSVLIALVRNDQLDLALTIFF 78
           LLDAFIR GKF+SAL ILD+      M+    + N  +Y+S+++AL + +Q+ LAL+I F
Sbjct: 106 LLDAFIRSGKFDSALDILDH------MEELGSNPNPHMYDSIIVALAKKNQVGLALSIMF 159

Query: 77  KLLDASNVNSSD 42
           KLL+AS+ N  +
Sbjct: 160 KLLEASDGNEEN 171


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