BLASTX nr result

ID: Angelica22_contig00049022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00049022
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]   148   4e-34
ref|XP_002512521.1| pentatricopeptide repeat-containing protein,...   148   5e-34
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28

>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/119 (62%), Positives = 95/119 (79%)
 Frame = -2

Query: 358 GDGYIKSSGIKMYSSFKCLKEAKNILFTNGDSDVICFNAMIDGYMKFGSVEDAKLLFEGF 179
           GD +I+S+GI+MY SF  ++ A+ +L  +G+SDVICFNAMIDGY+K G VE AK LF   
Sbjct: 163 GDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSM 222

Query: 178 EDKNVSSWNAMISGFARCGMIDEAREFFDRMPVKDDVSWSAMIDGYNQGGYYKEGIEIF 2
           EDKNV SWN M+SG A+CGMI+EARE F+ M  K+++SWSAMIDGY +GGYYKE +E+F
Sbjct: 223 EDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVF 281


>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/121 (59%), Positives = 94/121 (77%), Gaps = 2/121 (1%)
 Frame = -2

Query: 358 GDGYIKSSGIKMYSSFKCLKEAKNILFTNG-DSDVICFNAMIDGYMKFGSVEDAKLLFEG 182
           GDG+I SS I+MY+SF  L EA+ IL   G + D +C+NAMIDGY++FG VE A+ LFEG
Sbjct: 170 GDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEG 229

Query: 181 FEDKN-VSSWNAMISGFARCGMIDEAREFFDRMPVKDDVSWSAMIDGYNQGGYYKEGIEI 5
             D++ +S+WNAMISGF+RCGM++ AREFFD M  +D++SWSAMIDGY Q G + E +EI
Sbjct: 230 MPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEI 289

Query: 4   F 2
           F
Sbjct: 290 F 290



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
 Frame = -2

Query: 262 DVICFNAMIDGYMKFGSVEDAKLLFEGFEDKNVSSWNAMISGFARCGMIDEAREFFDRMP 83
           D +   +++D Y K G ++ A  +FE   +K VSSWNAMI G A  G  ++A + F +M 
Sbjct: 336 DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD 395

Query: 82  VK-DDVSWSAMIDGYNQGGYYKEGIEIF 2
           +  +++++  +++    GG  ++G+ IF
Sbjct: 396 INPNEITFVGVLNACAHGGLVQKGLTIF 423


>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/121 (59%), Positives = 94/121 (77%), Gaps = 2/121 (1%)
 Frame = -2

Query: 358 GDGYIKSSGIKMYSSFKCLKEAKNILFTNG-DSDVICFNAMIDGYMKFGSVEDAKLLFEG 182
           GDG+I SS I+MY+SF  L EA+ IL   G + D +C+NAMIDGY++FG VE A+ LFEG
Sbjct: 171 GDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEG 230

Query: 181 FEDKN-VSSWNAMISGFARCGMIDEAREFFDRMPVKDDVSWSAMIDGYNQGGYYKEGIEI 5
             D++ +S+WNAMISGF+RCGM++ AREFFD M  +D++SWSAMIDGY Q G + E +EI
Sbjct: 231 MPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEI 290

Query: 4   F 2
           F
Sbjct: 291 F 291



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
 Frame = -2

Query: 262 DVICFNAMIDGYMKFGSVEDAKLLFEGFEDKNVSSWNAMISGFARCGMIDEAREFFDRMP 83
           D +   +++D Y K G ++ A  +FE   +K VSSWNAMI G A  G  ++A + F +M 
Sbjct: 337 DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD 396

Query: 82  V-KDDVSWSAMIDGYNQGGYYKEGIEIF 2
           +  +++++  +++    GG  ++G+ IF
Sbjct: 397 IYPNEITFVGVLNACAHGGLVQKGLTIF 424


>ref|XP_002512521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548482|gb|EEF49973.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 422

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/119 (57%), Positives = 92/119 (77%)
 Frame = -2

Query: 358 GDGYIKSSGIKMYSSFKCLKEAKNILFTNGDSDVICFNAMIDGYMKFGSVEDAKLLFEGF 179
           GD +I+S+GI+MY++   +  A+ +L  +G+SDVICFNAMIDGY KFG V+ AK LFE  
Sbjct: 162 GDVHIRSAGIQMYATLGHMAAARRMLDEDGESDVICFNAMIDGYYKFGDVDSAKELFEKM 221

Query: 178 EDKNVSSWNAMISGFARCGMIDEAREFFDRMPVKDDVSWSAMIDGYNQGGYYKEGIEIF 2
           ED++V SWN M+SG A+ GM+ EARE F+ M  KD++SWS+MIDGY +GG YKE +E+F
Sbjct: 222 EDRSVGSWNVMVSGLAKNGMVKEARELFNDMREKDEISWSSMIDGYIKGGNYKEALEVF 280


>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/118 (51%), Positives = 87/118 (73%)
 Frame = -2

Query: 355 DGYIKSSGIKMYSSFKCLKEAKNILFTNGDSDVICFNAMIDGYMKFGSVEDAKLLFEGFE 176
           D +IKS+GI+MY+SF  L++A+  +F +G+SDV+C+N MIDGY+K G +E AK LF    
Sbjct: 166 DVHIKSAGIQMYASFGRLEDARK-MFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMP 224

Query: 175 DKNVSSWNAMISGFARCGMIDEAREFFDRMPVKDDVSWSAMIDGYNQGGYYKEGIEIF 2
            KN+ SWN MI+G A+ G + +AR+ FD M  +D++SWS+M+DGY   G YKE +EIF
Sbjct: 225 VKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIF 282


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