BLASTX nr result

ID: Angelica22_contig00048855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048855
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35295.3| unnamed protein product [Vitis vinifera]              117   8e-25
ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containi...   117   8e-25
emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]   117   8e-25
ref|XP_002526448.1| pentatricopeptide repeat-containing protein,...    99   3e-19
ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17

>emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  117 bits (294), Expect = 8e-25
 Identities = 55/97 (56%), Positives = 73/97 (75%)
 Frame = +2

Query: 2   SKSLTLAKTIHQQFLKSNFINNSAILEKLTRLYITCNQLTLARRLFNTISEPVKKSDVVI 181
           SKSLT AK IHQ FLK+    +S++L KLTRLY++CNQ+ LARRLF+ I  P     V++
Sbjct: 21  SKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP----SVIL 76

Query: 182 WNHLIRGYAWEGPYNEAIALYNKMIDIGLRPSKYTYP 292
           WN +IR YAW GP++ AI LY+ M+ +G+RP+KYTYP
Sbjct: 77  WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYP 113


>ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  117 bits (294), Expect = 8e-25
 Identities = 55/97 (56%), Positives = 73/97 (75%)
 Frame = +2

Query: 2   SKSLTLAKTIHQQFLKSNFINNSAILEKLTRLYITCNQLTLARRLFNTISEPVKKSDVVI 181
           SKSLT AK IHQ FLK+    +S++L KLTRLY++CNQ+ LARRLF+ I  P     V++
Sbjct: 21  SKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP----SVIL 76

Query: 182 WNHLIRGYAWEGPYNEAIALYNKMIDIGLRPSKYTYP 292
           WN +IR YAW GP++ AI LY+ M+ +G+RP+KYTYP
Sbjct: 77  WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYP 113


>emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  117 bits (294), Expect = 8e-25
 Identities = 55/97 (56%), Positives = 73/97 (75%)
 Frame = +2

Query: 2   SKSLTLAKTIHQQFLKSNFINNSAILEKLTRLYITCNQLTLARRLFNTISEPVKKSDVVI 181
           SKSLT AK IHQ FLK+    +S++L KLTRLY++CNQ+ LARRLF+ I  P     V++
Sbjct: 21  SKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP----SVIL 76

Query: 182 WNHLIRGYAWEGPYNEAIALYNKMIDIGLRPSKYTYP 292
           WN +IR YAW GP++ AI LY+ M+ +G+RP+KYTYP
Sbjct: 77  WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYP 113


>ref|XP_002526448.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534228|gb|EEF35943.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 557

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
 Frame = +2

Query: 2   SKSLTLAKTIHQQFLKSNFINNS-----AILEKLTRLYITCNQLTLARRLFNTISEPVKK 166
           SK L+  K IHQ  LK +   N+      ++EKL  LY+ CN+   AR LF+    P + 
Sbjct: 23  SKWLSQGKLIHQNLLKHHIAKNNDTHFRLVIEKLMHLYLVCNEDQYARHLFD--KSPQRP 80

Query: 167 SDVVIWNHLIRGYAWEGPYNEAIALYNKMIDIGLRPSKYTYP 292
             VVIWN LIR YAW GP+ EAI LY KM+++G++PSKYTYP
Sbjct: 81  RKVVIWNMLIRAYAWNGPFTEAINLYYKMLELGIQPSKYTYP 122


>ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|222872863|gb|EEF09994.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
 Frame = +2

Query: 2   SKSLTLAKTIHQQFLK-------SNFINNSAILEKLTRLYITCNQLTLARRLFNTISEPV 160
           SKSL   K IHQ  LK       +N  N     EKL  LYI C++L +AR +F+ +  P 
Sbjct: 22  SKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVFDKM--PH 79

Query: 161 KKSDVVIWNHLIRGYAWEGPYNEAIALYNKMIDIGLRPSKYTYP 292
           +  +VV+WN LIR YAW GPY EAI LY KM+  G+ P+++T+P
Sbjct: 80  RPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFP 123


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