BLASTX nr result
ID: Angelica22_contig00048812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00048812
(303 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi... 134 6e-30
ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi... 134 1e-29
emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera] 134 1e-29
ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28
ref|XP_003609609.1| Pentatricopeptide repeat-containing protein ... 127 7e-28
>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 134 bits (338), Expect = 6e-30
Identities = 65/103 (63%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
Frame = +2
Query: 2 ALKACARVKDLWGGISIHAQIHKYVFF---DDVYVQTALVDFYSKLNDIETSRKVFDDMK 172
ALKACAR+ GGISIH Q+ K+ F D +YV+TALVDFY KL D+E +RK+FD+M
Sbjct: 111 ALKACARIAYRMGGISIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMA 170
Query: 173 RKNVVSWNSLLIGYLKNGNLPMAQSFFDEIPEKDAISWNSMIT 301
+NVVSWNS+L GYLK+G+L +AQ FDEIP+KD ISWNSMI+
Sbjct: 171 ERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMIS 213
>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product
[Vitis vinifera]
Length = 580
Score = 134 bits (336), Expect = 1e-29
Identities = 64/103 (62%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
Frame = +2
Query: 2 ALKACARVKDLWGGISIHAQIHKYVFF---DDVYVQTALVDFYSKLNDIETSRKVFDDMK 172
ALKACAR+ GG+SIH Q+ K+ F D +YV+TALVDFY KL D+E +RK+FD+M
Sbjct: 111 ALKACARIAYRMGGLSIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMA 170
Query: 173 RKNVVSWNSLLIGYLKNGNLPMAQSFFDEIPEKDAISWNSMIT 301
+NVVSWNS+L GYLK+G+L +AQ FDEIP+KD ISWNSMI+
Sbjct: 171 ERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMIS 213
Score = 55.8 bits (133), Expect = 3e-06
Identities = 30/94 (31%), Positives = 53/94 (56%)
Frame = +2
Query: 17 ARVKDLWGGISIHAQIHKYVFFDDVYVQTALVDFYSKLNDIETSRKVFDDMKRKNVVSWN 196
AR D+ +S+ Q+ + F A++ Y + DI+++R FD M ++N VSW
Sbjct: 216 ARAGDMEKALSLFQQMPERNFAS----WNAMISGYVEFGDIDSARSFFDAMPQRNNVSWM 271
Query: 197 SLLIGYLKNGNLPMAQSFFDEIPEKDAISWNSMI 298
+++ GY K G++ A FD++ KD + +N+MI
Sbjct: 272 TMISGYSKCGDVDSACELFDQVGGKDLLLFNAMI 305
>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
Length = 841
Score = 134 bits (336), Expect = 1e-29
Identities = 64/103 (62%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
Frame = +2
Query: 2 ALKACARVKDLWGGISIHAQIHKYVFF---DDVYVQTALVDFYSKLNDIETSRKVFDDMK 172
ALKACAR+ GG+SIH Q+ K+ F D +YV+TALVDFY KL D+E +RK+FD+M
Sbjct: 107 ALKACARIAYRMGGLSIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMA 166
Query: 173 RKNVVSWNSLLIGYLKNGNLPMAQSFFDEIPEKDAISWNSMIT 301
+NVVSWNS+L GYLK+G+L +AQ FDEIP+KD ISWNSMI+
Sbjct: 167 ERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMIS 209
Score = 54.7 bits (130), Expect = 8e-06
Identities = 30/94 (31%), Positives = 52/94 (55%)
Frame = +2
Query: 17 ARVKDLWGGISIHAQIHKYVFFDDVYVQTALVDFYSKLNDIETSRKVFDDMKRKNVVSWN 196
AR D+ +S+ Q+ + F A++ Y + DI+++R FD M + N VSW
Sbjct: 212 ARAGDMEKALSLFQQMPERNFAS----WNAMISGYVEFGDIDSARSFFDAMPQXNNVSWM 267
Query: 197 SLLIGYLKNGNLPMAQSFFDEIPEKDAISWNSMI 298
+++ GY K G++ A FD++ KD + +N+MI
Sbjct: 268 TMISGYSKCGDVDSACELFDQVGGKDLLLFNAMI 301
>ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Glycine max]
Length = 576
Score = 130 bits (326), Expect = 1e-28
Identities = 63/100 (63%), Positives = 77/100 (77%)
Frame = +2
Query: 2 ALKACARVKDLWGGISIHAQIHKYVFFDDVYVQTALVDFYSKLNDIETSRKVFDDMKRKN 181
ALK+CAR+ D+ G+SIH Q+H + F VYVQTAL+D YSK+ D+ T+RKVFD+M K+
Sbjct: 110 ALKSCARIHDMLCGMSIHGQVHVFGFNTCVYVQTALLDLYSKIGDMGTARKVFDEMANKS 169
Query: 182 VVSWNSLLIGYLKNGNLPMAQSFFDEIPEKDAISWNSMIT 301
VVSWNSLL GY+K GNL AQ F EIP KD ISWNSMI+
Sbjct: 170 VVSWNSLLSGYVKAGNLDEAQYLFSEIPGKDVISWNSMIS 209
Score = 55.5 bits (132), Expect = 5e-06
Identities = 22/71 (30%), Positives = 44/71 (61%)
Frame = +2
Query: 86 DVYVQTALVDFYSKLNDIETSRKVFDDMKRKNVVSWNSLLIGYLKNGNLPMAQSFFDEIP 265
DV +++ Y+K ++ + +F M +N+ SWN+++ G++ G+L A+ FFD +P
Sbjct: 200 DVISWNSMISGYAKAGNVGQACTLFQRMPERNLSSWNAMIAGFIDCGSLVSAREFFDTMP 259
Query: 266 EKDAISWNSMI 298
++ +SW +MI
Sbjct: 260 RRNCVSWITMI 270
Score = 55.5 bits (132), Expect = 5e-06
Identities = 23/65 (35%), Positives = 42/65 (64%)
Frame = +2
Query: 104 ALVDFYSKLNDIETSRKVFDDMKRKNVVSWNSLLIGYLKNGNLPMAQSFFDEIPEKDAIS 283
A++ + + ++R+ FD M R+N VSW +++ GY K G++ A+ FD++ KD +S
Sbjct: 237 AMIAGFIDCGSLVSAREFFDTMPRRNCVSWITMIAGYSKGGDVDSARKLFDQMDHKDLLS 296
Query: 284 WNSMI 298
+N+MI
Sbjct: 297 YNAMI 301
>ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510664|gb|AES91806.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 576
Score = 127 bits (320), Expect = 7e-28
Identities = 61/99 (61%), Positives = 74/99 (74%)
Frame = +2
Query: 5 LKACARVKDLWGGISIHAQIHKYVFFDDVYVQTALVDFYSKLNDIETSRKVFDDMKRKNV 184
LK+CARV+D G+ IH +HK+ F VYVQTAL+D Y K+ D+ T+RKVFD+M KNV
Sbjct: 111 LKSCARVEDDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNV 170
Query: 185 VSWNSLLIGYLKNGNLPMAQSFFDEIPEKDAISWNSMIT 301
VSWNSLL GY+K GNL Q FFDEIP KD ISWN M++
Sbjct: 171 VSWNSLLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVS 209