BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048707
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535467.1| PREDICTED: probable RNA polymerase II transc...    77   2e-12
ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transc...    75   4e-12
ref|XP_004171236.1| PREDICTED: probable RNA polymerase II transc...    67   1e-09
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc...    65   4e-09
gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays]         65   6e-09

>ref|XP_003535467.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Glycine max]
          Length = 604

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/55 (63%), Positives = 44/55 (80%)
 Frame = -3

Query: 165 MAERQVIKRAKYKSCIKDPGTPGVLTMKRERFVFIPGDPRSLMKLNVQF*FIIGH 1
           M+ RQV+KRAKYK+ +KDPGTPGVL + ++RFVF P DP S  KL+V+F FI GH
Sbjct: 1   MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGH 55


>ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Glycine max]
          Length = 587

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/55 (61%), Positives = 44/55 (80%)
 Frame = -3

Query: 165 MAERQVIKRAKYKSCIKDPGTPGVLTMKRERFVFIPGDPRSLMKLNVQF*FIIGH 1
           M+ RQV+KRAKYK+ +KDPGTPGVL + +++FVF P DP S  KL+V+F FI GH
Sbjct: 1   MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDKFVFKPNDPTSKTKLDVEFRFIQGH 55


>ref|XP_004171236.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-3-like, partial [Cucumis sativus]
          Length = 220

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/64 (53%), Positives = 41/64 (64%)
 Frame = -3

Query: 192 NHIYIQHIIMAERQVIKRAKYKSCIKDPGTPGVLTMKRERFVFIPGDPRSLMKLNVQF*F 13
           N I +    M  + V K AKYK+ +KDPGTPGVL M   +FVF P DP S  KL+V+F F
Sbjct: 17  NQIQVSEGRMGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRF 76

Query: 12  IIGH 1
           I GH
Sbjct: 77  IKGH 80


>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Cucumis sativus]
          Length = 729

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/55 (58%), Positives = 38/55 (69%)
 Frame = -3

Query: 165 MAERQVIKRAKYKSCIKDPGTPGVLTMKRERFVFIPGDPRSLMKLNVQF*FIIGH 1
           M  + V K AKYK+ +KDPGTPGVL M   +FVF P DP S  KL+V+F FI GH
Sbjct: 1   MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGH 55


>gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays]
          Length = 476

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/46 (65%), Positives = 33/46 (71%)
 Frame = -3

Query: 138 AKYKSCIKDPGTPGVLTMKRERFVFIPGDPRSLMKLNVQF*FIIGH 1
           AKYK+ IKDPGTPG+L M  +RF F P DPRS MK NV F  I GH
Sbjct: 8   AKYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGH 53