BLASTX nr result

ID: Angelica22_contig00048593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048593
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520265.1| pentatricopeptide repeat-containing protein,...   182   2e-44
ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat...   181   7e-44
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]   181   7e-44
ref|XP_002302206.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42
ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago t...   171   7e-41

>ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540484|gb|EEF42051.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 681

 Score =  182 bits (462), Expect = 2e-44
 Identities = 82/116 (70%), Positives = 96/116 (82%)
 Frame = -3

Query: 348 TNGYGFEALALFTEMRCTGFVPTEITFTAVLSACDHCGLVEEGRKWFYAMKHEYGIEPGI 169
           TNGYG E L LF EM+  G  PT+ITFT VLSACDHCGLVEEGRKWF  MK++Y I+PGI
Sbjct: 515 TNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGI 574

Query: 168 EHFSCMVDLFSRAGCLGEAMKLIEQMPFKCDESMWASVLRGCVAHGDQILGKNIVK 1
           EH+SCMVDLF+RAGCL EA+ L+E MPF+ D SMW+SVLRGCVAHGD+ LGK + +
Sbjct: 575 EHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSSVLRGCVAHGDKDLGKKVAQ 630


>ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Vitis vinifera]
          Length = 685

 Score =  181 bits (458), Expect = 7e-44
 Identities = 83/116 (71%), Positives = 95/116 (81%)
 Frame = -3

Query: 348 TNGYGFEALALFTEMRCTGFVPTEITFTAVLSACDHCGLVEEGRKWFYAMKHEYGIEPGI 169
           TNG+G EAL +F +MR  G  PT+ITF  VLSACDHCGLVEEGRKWFYAMK +Y I PGI
Sbjct: 515 TNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGI 574

Query: 168 EHFSCMVDLFSRAGCLGEAMKLIEQMPFKCDESMWASVLRGCVAHGDQILGKNIVK 1
           EH+SCMVDL++RAG L +AM LIEQMP K D SMW+SVLRGCVAHG+ ILGK + K
Sbjct: 575 EHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAK 630


>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  181 bits (458), Expect = 7e-44
 Identities = 83/116 (71%), Positives = 95/116 (81%)
 Frame = -3

Query: 348 TNGYGFEALALFTEMRCTGFVPTEITFTAVLSACDHCGLVEEGRKWFYAMKHEYGIEPGI 169
           TNG+G EAL +F +MR  G  PT+ITF  VLSACDHCGLVEEGRKWFYAMK +Y I PGI
Sbjct: 515 TNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGI 574

Query: 168 EHFSCMVDLFSRAGCLGEAMKLIEQMPFKCDESMWASVLRGCVAHGDQILGKNIVK 1
           EH+SCMVDL++RAG L +AM LIEQMP K D SMW+SVLRGCVAHG+ ILGK + K
Sbjct: 575 EHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAK 630



 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/106 (45%), Positives = 66/106 (62%)
 Frame = -3

Query: 345  NGYGFEALALFTEMRCTGFVPTEITFTAVLSACDHCGLVEEGRKWFYAMKHEYGIEPGIE 166
            NG   +AL +F E+   G  P EIT   VL AC+  GLV+EG   F +M+ EYG+ P IE
Sbjct: 1121 NGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIE 1180

Query: 165  HFSCMVDLFSRAGCLGEAMKLIEQMPFKCDESMWASVLRGCVAHGD 28
            H++C+VD+ SR G L EAM ++E MP +    +W S+L  C  +GD
Sbjct: 1181 HYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGD 1226


>ref|XP_002302206.1| predicted protein [Populus trichocarpa] gi|222843932|gb|EEE81479.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score =  174 bits (440), Expect = 9e-42
 Identities = 78/116 (67%), Positives = 97/116 (83%)
 Frame = -3

Query: 348 TNGYGFEALALFTEMRCTGFVPTEITFTAVLSACDHCGLVEEGRKWFYAMKHEYGIEPGI 169
           TNG+G EAL LF EMR  G  PTEITFT VLSACDHCGLV+EG +WF  M+++Y I+PGI
Sbjct: 514 TNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDPGI 573

Query: 168 EHFSCMVDLFSRAGCLGEAMKLIEQMPFKCDESMWASVLRGCVAHGDQILGKNIVK 1
           EH+SCMVDLF+RAGCL EAM LI++MPF+ D SMW+SVLRGC+AHG++ LG+ + +
Sbjct: 574 EHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVAQ 629


>ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355523315|gb|AET03769.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 672

 Score =  171 bits (432), Expect = 7e-41
 Identities = 77/112 (68%), Positives = 90/112 (80%)
 Frame = -3

Query: 348 TNGYGFEALALFTEMRCTGFVPTEITFTAVLSACDHCGLVEEGRKWFYAMKHEYGIEPGI 169
           TNGYG EAL LF EM  +G  P+ ITFT +LSACDHCGLVEEGR  F  MKH+Y I PGI
Sbjct: 505 TNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGI 564

Query: 168 EHFSCMVDLFSRAGCLGEAMKLIEQMPFKCDESMWASVLRGCVAHGDQILGK 13
           EH+SCMVDLF+R GC GEAM LIE+MPF+ D +MW SVLRGCV+HG++ +GK
Sbjct: 565 EHYSCMVDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCVSHGNKTIGK 616


Top