BLASTX nr result

ID: Angelica22_contig00048580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048580
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    59   3e-07
ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
 Frame = +2

Query: 2   LVTEVLVRLPVKT*LVCKSVSKPWLSLISNPNFIKSHLHYVINNNNNPMLLDILVPVDTV 181
           ++ E+L RLP K  L C+SVSKPW +LI  PNF+K HL + ++ ++N  L  IL     V
Sbjct: 8   MIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSN--LYIILRTTSHV 65

Query: 182 PEPSF------NRCT----LEHPDMVYIAELETFLGING 268
               F      N C     L HP M Y   ++    +NG
Sbjct: 66  HYMDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNG 104


>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 895

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 38/48 (79%)
 Frame = +2

Query: 2   LVTEVLVRLPVKT*LVCKSVSKPWLSLISNPNFIKSHLHYVINNNNNP 145
           ++T +L+RLPVK+ L+CKSVSK W S+IS P+F++SHL   I + +NP
Sbjct: 23  ILTNILLRLPVKSLLICKSVSKYWRSIISRPSFVESHL---IQSQHNP 67


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = +2

Query: 2   LVTEVLVRLPVKT*LVCKSVSKPWLSLISNPNFIKSHLHYVINNNNNPMLL 154
           ++ ++ +RLPVK  L C+ + K W SLISN NFI +H  Y I++NNN  L+
Sbjct: 9   VLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLI 59


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