BLASTX nr result

ID: Angelica22_contig00048518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048518
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   123   5e-26
gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...   116   6e-24
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   114   3e-23
ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus ...   111   2e-22
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  123 bits (308), Expect = 5e-26
 Identities = 79/226 (34%), Positives = 113/226 (50%), Gaps = 11/226 (4%)
 Frame = -3

Query: 679 LPHEMIGEILCRIPVKPLLRFRCVSKGWCSIIDSNAFAKKQLKNTLACNAGVGLMLMKHG 500
           LP EMI EILCR+P K LL  R VSK WC++ID   F K  LK+++  ++ + ++L    
Sbjct: 4   LPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRT-- 61

Query: 499 GDKRFYLAGFXXXXXXXXXXXXXXD--PLKSFLSDAQIMGACNGLMCVFKNKRKDIFVLN 326
                +   F                 PL  +    +++G+ NGL+C+  N   DI V N
Sbjct: 62  -TSHVHYMDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCI-SNVVDDIAVWN 119

Query: 325 PITRKSRKIVGVPTEFPSSFST--IDIQICGFGYDEISDDFKVVMIAECYVQFRG----- 167
           P TRK R +  +P E    F T    + + GFGYD + DD+K+V IA    QF G     
Sbjct: 120 PSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIA----QFGGGGKRS 175

Query: 166 --LIAMVYGLKTDAWTRIQDVPSNIRFINIRGFFASGCLHWMAIED 35
                 VY L+  +W RI D+P  + +    G FA+G LHW+  E+
Sbjct: 176 FESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGEN 221


>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score =  116 bits (290), Expect = 6e-24
 Identities = 72/217 (33%), Positives = 106/217 (48%), Gaps = 5/217 (2%)
 Frame = -3

Query: 685 MALPHEMIGEILCRIPVKPLLRFRCVSKGWCSIIDSNAFAKKQLKNTLACNAGV--GLML 512
           + LP E+I EIL R+P+K L +F CVSK W  +I S AF KK +K T      +   L+ 
Sbjct: 9   LLLPDELITEILLRLPIKSLSKFMCVSKSWLQLISSPAFVKKHIKLTANDKGYIYHRLIF 68

Query: 511 MKHGGDKRFY-LAGFXXXXXXXXXXXXXXDPLKSFLSDAQIMGACNGLMCVFKNKRKDIF 335
                D +F  L                  P++       I+G+ NGL+CV   ++++ +
Sbjct: 69  RNTNNDFKFCPLPPLFTNQQLIEEILHIDSPIERTTLSTHIVGSVNGLICVAHVRQREAY 128

Query: 334 VLNPITRKSRKIVGVPTEFPSSFSTI--DIQICGFGYDEISDDFKVVMIAECYVQFRGLI 161
           + NP   KS+       E P S S +  D   CGFGYDE  DD+KVV I          +
Sbjct: 129 IWNPAITKSK-------ELPKSTSNLCSDGIKCGFGYDESRDDYKVVFIDYPIRHNHRTV 181

Query: 160 AMVYGLKTDAWTRIQDVPSNIRFINIRGFFASGCLHW 50
             +Y L+T++WT + D    I  +N+ G F +G L+W
Sbjct: 182 VNIYSLRTNSWTTLHDQLQGIFLLNLHGRFVNGKLYW 218


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  114 bits (284), Expect = 3e-23
 Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
 Frame = -3

Query: 679 LPHEMIGEILCRIPVKPLLRFRCVSKGWCSIIDSNAFAKKQLKNTLACNAGVGLMLMKHG 500
           LP EMI EILCR+  K LL  RCVSK W ++IDS  F    L +++     + ++L    
Sbjct: 4   LPLEMIAEILCRLTAKKLLCCRCVSKRWRTLIDSPTFIYLHLNHSIESPCNLSIILK--- 60

Query: 499 GDKRFYLAGFXXXXXXXXXXXXXXDPLKSFLSDAQIMGACNGLMCVFKNKRKDIFVLNPI 320
                Y   F               PL  +    +I+G+CNGL+C+  N   DI + NP 
Sbjct: 61  -SSELYSLSF----DLLDNIQPLDHPLMCYNHGVKILGSCNGLLCIC-NIVDDIALWNPS 114

Query: 319 TRKSRKIVGVPTEFPSSFS--TIDIQICGFGYDEISDDFKVVMIAECYVQFRGL------ 164
            R  R +  +P E    F   +  + + GFGYD  +DD+K+V IA    QF G+      
Sbjct: 115 IRAHRVVPYLPVELKRYFGMCSCRVSVFGFGYDLSNDDYKLVRIA----QFGGVDRKSFE 170

Query: 163 -IAMVYGLKTDAWTRIQDVPSNIRFINIRGFFASGCLHWMAIED 35
               V+ L+ ++W RI D+P  + +    G +A+G LHW+  +D
Sbjct: 171 SEVKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALHWLVSQD 214


>ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540308|gb|EEF41879.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score =  111 bits (277), Expect = 2e-22
 Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 6/218 (2%)
 Frame = -3

Query: 670 EMIGEILCRIPVKPLLRFRCVSKGWCSIIDSNAFAKKQLKNTLACNAGVGLMLMKH--GG 497
           ++I ++L R+PVK LLRFRC+SK +C++ID+  F K  L  ++       L+L++H   G
Sbjct: 7   DIIFDVLLRLPVKTLLRFRCISKSYCTLIDNPDFIKAHLDTSIQTKPRKKLILLRHQSNG 66

Query: 496 DKRFYLAGFXXXXXXXXXXXXXXDPLKSFLSDAQIMGACNGLMCVFKNKRKDIFVLNPIT 317
              FY A                 P+KS  +  +I+G+CN L+ + +N  K + + NP T
Sbjct: 67  VAEFYAA---DHNGGLIDPIKLKSPIKSKSNGTRIVGSCNSLVLLMQNTDK-LLLWNPFT 122

Query: 316 RKSRKIVGVPTEFPSSFST--IDIQICGFGYDEISDDFKVVMIAECYVQFRGLIAMVYGL 143
            +  KI+  P    ++F++  +   + G GYD  SDD+KVV I +C  +  G+   +Y L
Sbjct: 123 TQ-YKILPEPQREKATFTSQYLQYDVFGLGYDAASDDYKVVRIQKCRSKKDGV--GIYSL 179

Query: 142 KTDAWTRIQDVP-SNIRF-INIRGFFASGCLHWMAIED 35
           ++++WTR+ D P  N  F     G   SG L+W+  ++
Sbjct: 180 RSNSWTRLHDFPCDNYEFDWTAMGKHVSGTLYWLCAKE 217


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  110 bits (275), Expect = 3e-22
 Identities = 80/247 (32%), Positives = 113/247 (45%), Gaps = 21/247 (8%)
 Frame = -3

Query: 685 MALPHEMIGEILCRIPVKPLLRFRCVSKGWCSIIDSNAFAKKQLKNTLACNAGVGLMLMK 506
           M L  E+  +IL R+PVK L RFRCVSK WC  IDS  F    LK +   +  + L+L  
Sbjct: 1   MMLFPEITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRD 60

Query: 505 HGGDKRFYLAGFXXXXXXXXXXXXXXDPLKSFLSDAQIMGACNGLMCVFKNKRKDIFVLN 326
                   L                 +PLKS     ++MG+CNGL+ +  N    I + N
Sbjct: 61  ATN-----LCTVDLDSPDFTSIELKNNPLKSDDCATEVMGSCNGLLALL-NSDFSIALYN 114

Query: 325 PITRKSRKIVGVPTEFPSSFSTIDI----QICGFGYDEISDDFKVVMIAECYVQ----FR 170
           P TR+ + I   P E P+      +       GFG+D I++D+KVV     Y      F 
Sbjct: 115 PSTREKKMIPVSPLELPNDLDDSKVSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPDGFF 174

Query: 169 GLIAMVYGLKTDAWTRIQDVPSNIRFI----------NIRGFFASGCLHWMAI---EDRT 29
                VY LK+++W RI D P ++RFI             G FA+  +HW A    + + 
Sbjct: 175 HCEVKVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKE 234

Query: 28  NGKEVQV 8
           NG ++ V
Sbjct: 235 NGSDLIV 241


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