BLASTX nr result

ID: Angelica22_contig00048373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048373
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277740.1| PREDICTED: RING-H2 finger protein ATL29 [Vit...    64   2e-08
ref|XP_002527665.1| RING-H2 finger protein ATL3B precursor, puta...    61   8e-08

>ref|XP_002277740.1| PREDICTED: RING-H2 finger protein ATL29 [Vitis vinifera]
          Length = 281

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/56 (50%), Positives = 40/56 (71%)
 Frame = +3

Query: 63  CRCFLHRVAHSWRLRHNPAATSVGPGSAATAKGLDPEIIKAFPCFMYSTVKEYRRE 230
           CRCF+  ++H+W L  +P+ T  GPG ++   GLDP II +FP F+YSTVK+YR +
Sbjct: 40  CRCFMGNLSHTW-LGRSPSGTH-GPGGSSAVHGLDPSIIDSFPTFVYSTVKDYREQ 93


>ref|XP_002527665.1| RING-H2 finger protein ATL3B precursor, putative [Ricinus communis]
           gi|223532970|gb|EEF34736.1| RING-H2 finger protein ATL3B
           precursor, putative [Ricinus communis]
          Length = 266

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 24/56 (42%), Positives = 36/56 (64%)
 Frame = +3

Query: 63  CRCFLHRVAHSWRLRHNPAATSVGPGSAATAKGLDPEIIKAFPCFMYSTVKEYRRE 230
           CRCF+  +  SW LR  P+  ++   ++    GLDP +I+ FP F YS+V+E+RRE
Sbjct: 29  CRCFMDGIVSSWHLRRTPSGNAINATNSPANSGLDPSLIQLFPTFGYSSVREFRRE 84


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