BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048323
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     161   5e-38
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   159   2e-37
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   154   7e-36
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   154   7e-36
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     154   7e-36

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  161 bits (408), Expect = 5e-38
 Identities = 72/114 (63%), Positives = 92/114 (80%)
 Frame = -2

Query: 344 LYVCDIEHNLLQIEHTNKRKRDDENLTYLWHCRLGHISENRLRTLHKEGLLESFDFESYP 165
           LYV ++E + +   +T ++  +D N T++WHCRLGHI++ R+  LHK+GLL SFDFES+ 
Sbjct: 411 LYVLNLEASPIYNINTERQLSNDINPTFIWHCRLGHINKKRMEKLHKDGLLHSFDFESFE 470

Query: 164 TCESCLLGKMTKSPFSGHGERAADLLGLVHTDVCGPMSTQDMGGFSYFITFTDD 3
           TCESCLLGKMTK+PF+GH ERA+DLL LVHTDVCGPMS+   GG+ YFITFTDD
Sbjct: 471 TCESCLLGKMTKAPFTGHSERASDLLALVHTDVCGPMSSTARGGYQYFITFTDD 524


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  159 bits (402), Expect = 2e-37
 Identities = 70/99 (70%), Positives = 82/99 (82%)
 Frame = -2

Query: 299 TNKRKRDDENLTYLWHCRLGHISENRLRTLHKEGLLESFDFESYPTCESCLLGKMTKSPF 120
           T K K +D N T+LWHCRLGHI+E  ++ LH +GLL SFD+ESY TCESCLLGKMTK+PF
Sbjct: 70  TKKFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYETCESCLLGKMTKAPF 129

Query: 119 SGHGERAADLLGLVHTDVCGPMSTQDMGGFSYFITFTDD 3
           +GH ERA+DLLGL+HTDVCGPMST   G + YFITFTDD
Sbjct: 130 TGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDD 168


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  154 bits (389), Expect = 7e-36
 Identities = 67/93 (72%), Positives = 81/93 (87%)
 Frame = -2

Query: 281 DDENLTYLWHCRLGHISENRLRTLHKEGLLESFDFESYPTCESCLLGKMTKSPFSGHGER 102
           +D N T++WHCRLGHI+E R++ LH++GLL SFDFES+ TCESCLLGKMTK+PF+G  ER
Sbjct: 376 NDLNPTFIWHCRLGHINEKRMKKLHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSER 435

Query: 101 AADLLGLVHTDVCGPMSTQDMGGFSYFITFTDD 3
           A++LLGLVHTDVCGPMS+   GGF YFITFTDD
Sbjct: 436 ASELLGLVHTDVCGPMSSTARGGFGYFITFTDD 468


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score =  154 bits (389), Expect = 7e-36
 Identities = 68/114 (59%), Positives = 90/114 (78%)
 Frame = -2

Query: 344 LYVCDIEHNLLQIEHTNKRKRDDENLTYLWHCRLGHISENRLRTLHKEGLLESFDFESYP 165
           LY+ +++   +   +  ++  +D N T++WHCRLGHI+E R+  LH++GLL SFDFES+ 
Sbjct: 503 LYIVNLDGCSVYNINAKRQHPNDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFE 562

Query: 164 TCESCLLGKMTKSPFSGHGERAADLLGLVHTDVCGPMSTQDMGGFSYFITFTDD 3
           TCESCLLGKMTK+PF+G  +RA++LLGLVHTDVCGPMS+   GGF YFITFTDD
Sbjct: 563 TCESCLLGKMTKAPFTGQSKRASELLGLVHTDVCGPMSSTARGGFGYFITFTDD 616


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  154 bits (389), Expect = 7e-36
 Identities = 68/114 (59%), Positives = 90/114 (78%)
 Frame = -2

Query: 344 LYVCDIEHNLLQIEHTNKRKRDDENLTYLWHCRLGHISENRLRTLHKEGLLESFDFESYP 165
           LY+ +++   +   +  ++  +D N T++WHCRLGHI+E R+  LH++GLL SFDFES+ 
Sbjct: 503 LYIVNLDGCSVYNINAKRQHPNDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFE 562

Query: 164 TCESCLLGKMTKSPFSGHGERAADLLGLVHTDVCGPMSTQDMGGFSYFITFTDD 3
           TCESCLLGKMTK+PF+G  +RA++LLGLVHTDVCGPMS+   GGF YFITFTDD
Sbjct: 563 TCESCLLGKMTKAPFTGQSKRASELLGLVHTDVCGPMSSTARGGFGYFITFTDD 616