BLASTX nr result

ID: Angelica22_contig00048245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048245
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago ...   108   3e-22
ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat...   105   3e-21
ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat...   105   4e-21
ref|XP_002893401.1| pentatricopeptide repeat-containing protein ...   102   3e-20
ref|NP_173972.1| pentatricopeptide repeat-containing protein [Ar...   101   7e-20

>ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago truncatula]
           gi|355515382|gb|AES97005.1| hypothetical protein
           MTR_5g044120 [Medicago truncatula]
          Length = 507

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/66 (74%), Positives = 55/66 (83%)
 Frame = +1

Query: 151 VNSDHLLRVCTILYQQQNSPVSKLHSSLTHSNFQLTHEFFLQVCNNFPFSWKPVYKFFHF 330
           VN + LL+VCTILYQQQNSP S+LHS LT SNF LTHEFFLQVCNNFP+SW+PVY+FF F
Sbjct: 32  VNREELLKVCTILYQQQNSPDSRLHSKLTSSNFNLTHEFFLQVCNNFPYSWRPVYRFFLF 91

Query: 331 TLLNPN 348
           T    N
Sbjct: 92  TQQEKN 97


>ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Glycine max]
          Length = 494

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/67 (71%), Positives = 54/67 (80%)
 Frame = +1

Query: 151 VNSDHLLRVCTILYQQQNSPVSKLHSSLTHSNFQLTHEFFLQVCNNFPFSWKPVYKFFHF 330
           VN DHLLRVCTILYQQQNSP  +L S L  S FQLTHEFFLQVCN FP+SW+PVY+FF +
Sbjct: 31  VNPDHLLRVCTILYQQQNSPEPRLTSKLASSEFQLTHEFFLQVCNKFPYSWRPVYRFFLY 90

Query: 331 TLLNPNF 351
           T   P+F
Sbjct: 91  TQSLPHF 97


>ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Cucumis sativus]
          Length = 505

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/70 (65%), Positives = 54/70 (77%)
 Frame = +1

Query: 142 PARVNSDHLLRVCTILYQQQNSPVSKLHSSLTHSNFQLTHEFFLQVCNNFPFSWKPVYKF 321
           P  ++S HL RVCT+LYQQQNSP  KLH+ L   NF L+HEFFLQVCN FP SW+PVY+F
Sbjct: 39  PQPIDSTHLRRVCTVLYQQQNSPDLKLHTKLLACNFNLSHEFFLQVCNTFPLSWRPVYRF 98

Query: 322 FHFTLLNPNF 351
           F FT  +PNF
Sbjct: 99  FQFTETHPNF 108


>ref|XP_002893401.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339243|gb|EFH69660.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 500

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/68 (67%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
 Frame = +1

Query: 151 VNSDHLLRVCTILYQQQNSPVSKLHSSLTHSNFQLTHEFFLQVCNNFPFSWKPVYKFFHF 330
           +N DHLLRVCTILYQQQNSP S+L S L+ + FQLTHEFFLQVCNNFP SW+PV++FF +
Sbjct: 41  INQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFFLY 100

Query: 331 TLL-NPNF 351
           + + +P+F
Sbjct: 101 SQIHHPDF 108


>ref|NP_173972.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75263259|sp|Q9FZD4.1|PPR59_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g26500 gi|9797751|gb|AAF98569.1|AC013427_12
           Contains similarity to a hypothetical protein T12C14_170
           gi|7340718 from Arabidopsis thaliana BAC T12C14
           gb|AL162507 and contains multiple PPR PF|01535 repeats
           [Arabidopsis thaliana] gi|332192576|gb|AEE30697.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 505

 Score =  101 bits (251), Expect = 7e-20
 Identities = 44/61 (72%), Positives = 53/61 (86%)
 Frame = +1

Query: 151 VNSDHLLRVCTILYQQQNSPVSKLHSSLTHSNFQLTHEFFLQVCNNFPFSWKPVYKFFHF 330
           +N DHLLRVCTILYQQQNSP S+L S L+ + FQLTHEFFLQVCNNFP SW+PV++FF +
Sbjct: 41  INQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFFLY 100

Query: 331 T 333
           +
Sbjct: 101 S 101


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