BLASTX nr result

ID: Angelica22_contig00048216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048216
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519998.1| pentatricopeptide repeat-containing protein,...   112   2e-23
ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_003516740.1| PREDICTED: pentatricopeptide repeat-containi...   102   4e-20
dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]                                98   8e-19
ref|XP_002868469.1| hypothetical protein ARALYDRAFT_330235 [Arab...    97   1e-18

>ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540762|gb|EEF42322.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/75 (72%), Positives = 63/75 (84%)
 Frame = +2

Query: 2   LELAYQLLLAMDDFNLKKNCETYEILLDYYVSAGRLEDTWSVIAMMKREGFQFNSFVYSK 181
           L +A ++L  +DD  L +N ETYEILLDY V+AGRLEDTWSVI  MK++GFQ NSFVYSK
Sbjct: 107 LRVAERVLRILDDLGLHRNQETYEILLDYNVNAGRLEDTWSVINEMKQKGFQLNSFVYSK 166

Query: 182 VIGLYRDNGMWKKAL 226
           VIGLYRDNGMWKKA+
Sbjct: 167 VIGLYRDNGMWKKAI 181


>ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 881

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/75 (64%), Positives = 59/75 (78%)
 Frame = +2

Query: 2   LELAYQLLLAMDDFNLKKNCETYEILLDYYVSAGRLEDTWSVIAMMKREGFQFNSFVYSK 181
           L LA  +L  MDD  + ++ ETY+I LDYYV AGRLEDTWS I  MK++GF  NSF+YSK
Sbjct: 170 LGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTWSTINEMKQKGFPLNSFMYSK 229

Query: 182 VIGLYRDNGMWKKAL 226
           V+G+YRDNGMWKKA+
Sbjct: 230 VVGIYRDNGMWKKAI 244


>ref|XP_003516740.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 554

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/75 (64%), Positives = 59/75 (78%)
 Frame = +2

Query: 2   LELAYQLLLAMDDFNLKKNCETYEILLDYYVSAGRLEDTWSVIAMMKREGFQFNSFVYSK 181
           L LA  +L  MD   + ++ ETY+I LDYYV AGRLEDTWS I +MK++GF  NSFVYSK
Sbjct: 167 LGLANGVLKEMDYSGIWRSKETYQIFLDYYVGAGRLEDTWSTINVMKQKGFPLNSFVYSK 226

Query: 182 VIGLYRDNGMWKKAL 226
           V+G+YRDNGMWKKA+
Sbjct: 227 VVGIYRDNGMWKKAI 241


>dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]
          Length = 517

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/74 (62%), Positives = 55/74 (74%)
 Frame = +2

Query: 5   ELAYQLLLAMDDFNLKKNCETYEILLDYYVSAGRLEDTWSVIAMMKREGFQFNSFVYSKV 184
           +LA + L  M+D  + KN ET EI LDYYVS  RL DTW +I  MKR+G+Q NSF YS+V
Sbjct: 168 KLANRALRVMEDLGMCKNQETLEIFLDYYVSGRRLSDTWRIIGDMKRKGYQLNSFAYSRV 227

Query: 185 IGLYRDNGMWKKAL 226
           I LYRDNGMWKKA+
Sbjct: 228 IELYRDNGMWKKAM 241


>ref|XP_002868469.1| hypothetical protein ARALYDRAFT_330235 [Arabidopsis lyrata subsp.
           lyrata] gi|297314305|gb|EFH44728.1| hypothetical protein
           ARALYDRAFT_330235 [Arabidopsis lyrata subsp. lyrata]
          Length = 448

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/75 (62%), Positives = 59/75 (78%)
 Frame = +2

Query: 2   LELAYQLLLAMDDFNLKKNCETYEILLDYYVSAGRLEDTWSVIAMMKREGFQFNSFVYSK 181
           LELA ++L  M + N+ KN ET EILL+YYVSAGRLE++W V+  MK+  F+ NSFVY K
Sbjct: 87  LELAVRVLDHMKEENVDKNQETCEILLNYYVSAGRLEESWRVVNEMKKRMFRLNSFVYGK 146

Query: 182 VIGLYRDNGMWKKAL 226
           +I +YRDNGMWKKAL
Sbjct: 147 IIRIYRDNGMWKKAL 161


Top