BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048210
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB18333.1| RNA polymerase beta subunit, partial [Flagellaria...    70   4e-13
gb|AFB70745.1| DNA-directed RNA polymerase subunit beta, partial...    68   5e-13
ref|XP_002457906.1| hypothetical protein SORBIDRAFT_03g020184 [S...    66   8e-13
sp|A7M958.2|RPOB_CUSRE RecName: Full=DNA-directed RNA polymerase...    66   1e-12
ref|YP_005097866.1| RNA polymerase beta subunit (chloroplast) [C...    68   2e-12

>gb|AFB18333.1| RNA polymerase beta subunit, partial [Flagellaria indica]
          Length = 1081

 Score = 70.5 bits (171), Expect(2) = 4e-13
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = +3

Query: 87  KQIGTIENAILEFY*HLACVVGDLVFSESLC*ELQEKFFQQKCE 218
           K+IG+ ENAILEFY   ACV GDLVFSESLC ELQ+KFFQQ+CE
Sbjct: 224 KKIGSKENAILEFYQQFACVGGDLVFSESLCKELQKKFFQQRCE 267



 Score = 28.9 bits (63), Expect(2) = 4e-13
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +1

Query: 7   AMG*NLKEISKNVCYH*IILS 69
           AMG NL+EI  NVCY  I+LS
Sbjct: 196 AMGSNLREILDNVCYPEILLS 216


>gb|AFB70745.1| DNA-directed RNA polymerase subunit beta, partial (chloroplast)
           [Didierea madagascariensis]
          Length = 1014

 Score = 67.8 bits (164), Expect(2) = 5e-13
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = +3

Query: 87  KQIGTIENAILEFY*HLACVVGDLVFSESLC*ELQEKFFQQKCE 218
           K+IG+ ENAILEFY   ACV GD VFSESLC ELQ+KFFQQ+CE
Sbjct: 199 KKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCE 242



 Score = 31.2 bits (69), Expect(2) = 5e-13
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +1

Query: 7   AMG*NLKEISKNVCYH*IILSLL 75
           AMG NL+EI  NVCY  IILS L
Sbjct: 171 AMGSNLREILDNVCYPEIILSFL 193


>ref|XP_002457906.1| hypothetical protein SORBIDRAFT_03g020184 [Sorghum bicolor]
           gi|241929881|gb|EES03026.1| hypothetical protein
           SORBIDRAFT_03g020184 [Sorghum bicolor]
          Length = 294

 Score = 66.2 bits (160), Expect(2) = 8e-13
 Identities = 33/44 (75%), Positives = 36/44 (81%)
 Frame = +3

Query: 87  KQIGTIENAILEFY*HLACVVGDLVFSESLC*ELQEKFFQQKCE 218
           K+I + E AILEFY   ACV GDLVFSESLC ELQ+KFFQQKCE
Sbjct: 129 KRIESKEKAILEFYQQFACVGGDLVFSESLCEELQKKFFQQKCE 172



 Score = 32.0 bits (71), Expect(2) = 8e-13
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +1

Query: 7   AMG*NLKEISKNVCYH*IILS 69
           AMG NL+EI  NVCYH I LS
Sbjct: 101 AMGSNLREILDNVCYHEIFLS 121


>sp|A7M958.2|RPOB_CUSRE RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta; Short=RNA polymerase subunit beta
          Length = 1070

 Score = 65.9 bits (159), Expect(2) = 1e-12
 Identities = 32/44 (72%), Positives = 36/44 (81%)
 Frame = +3

Query: 87  KQIGTIENAILEFY*HLACVVGDLVFSESLC*ELQEKFFQQKCE 218
           K+IG+ ENAILEFY   ACV GD +FSESLC ELQ KFFQQ+CE
Sbjct: 214 KKIGSKENAILEFYKKFACVGGDPLFSESLCKELQNKFFQQRCE 257



 Score = 32.0 bits (71), Expect(2) = 1e-12
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = +1

Query: 1   LLAMG*NLKEISKNVCYH*IILSLL 75
           L AMG NL+EI +NVCY  I+LS L
Sbjct: 184 LSAMGLNLREILENVCYPEILLSFL 208


>ref|YP_005097866.1| RNA polymerase beta subunit (chloroplast) [Colocasia esculenta]
           gi|340536631|gb|AEK48398.1| RNA polymerase beta subunit
           (chloroplast) [Colocasia esculenta]
           gi|340536718|gb|AEK48484.1| RNA polymerase beta subunit
           (chloroplast) [Colocasia esculenta]
          Length = 1072

 Score = 67.8 bits (164), Expect(2) = 2e-12
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = +3

Query: 87  KQIGTIENAILEFY*HLACVVGDLVFSESLC*ELQEKFFQQKCE 218
           K+IG+ ENAILEFY   ACV GD VFSESLC ELQ+KFFQQ+CE
Sbjct: 214 KKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCE 257



 Score = 29.3 bits (64), Expect(2) = 2e-12
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = +1

Query: 7   AMG*NLKEISKNVCYH*IILS 69
           AMG NLKEI  NVCY  I LS
Sbjct: 186 AMGLNLKEILDNVCYPEIFLS 206