BLASTX nr result

ID: Angelica22_contig00048207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048207
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD66733.1| orf136a [Beta vulgaris subsp. vulgaris] gi|54606...   120   2e-25
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   115   3e-24
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   112   3e-23
emb|CAA72990.1| unnamed protein product [Brassica oleracea var. ...   110   2e-22
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   108   4e-22

>dbj|BAD66733.1| orf136a [Beta vulgaris subsp. vulgaris] gi|54606754|dbj|BAD66777.1|
           orf136a [Beta vulgaris subsp. vulgaris]
          Length = 136

 Score =  120 bits (300), Expect = 2e-25
 Identities = 56/90 (62%), Positives = 67/90 (74%)
 Frame = -2

Query: 271 PADSHFQATVHVLQYLKGTINMGLFYPSHNELFLKGYCDSDWGSCAFSTKSLSGYAMFLG 92
           P   H QA  HV++YL GT++ GL YP+ +EL L  +CDSDWG+CAFS +S +GY +FLG
Sbjct: 4   PRRPHLQAATHVVRYLAGTLDWGLDYPTDSELKLTAFCDSDWGTCAFSARSFTGYCVFLG 63

Query: 91  DSLISWKTKKQKIVSKSSCEAELRSMSQTT 2
            SLISWKTKKQK  SKSS EAE R M QTT
Sbjct: 64  RSLISWKTKKQKTFSKSSAEAEYRCMPQTT 93


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/93 (55%), Positives = 68/93 (73%)
 Frame = -2

Query: 283  FLNSPADSHFQATVHVLQYLKGTINMGLFYPSHNELFLKGYCDSDWGSCAFSTKSLSGYA 104
            F+N+P   H++A + VL+Y+KG+   GLF PS N L L  +CDSDWG C  S +S+SGY 
Sbjct: 1534 FMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFCDSDWGGCRMSRRSVSGYC 1593

Query: 103  MFLGDSLISWKTKKQKIVSKSSCEAELRSMSQT 5
            +FLG SLISWK+KKQ  VS+SS EAE R+M+ T
Sbjct: 1594 VFLGSSLISWKSKKQTNVSRSSAEAEYRAMANT 1626


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/91 (58%), Positives = 67/91 (73%)
 Frame = -2

Query: 283  FLNSPADSHFQATVHVLQYLKGTINMGLFYPSHNELFLKGYCDSDWGSCAFSTKSLSGYA 104
            F +SP +SH +A   V+ YLKGTI +GLFY S ++L LK Y D+DWGSC  S +S SG  
Sbjct: 1280 FSSSPKNSHLKAAQKVVHYLKGTIGLGLFYSSKSDLCLKAYTDADWGSCVDSRRSTSGIC 1339

Query: 103  MFLGDSLISWKTKKQKIVSKSSCEAELRSMS 11
            MFLGDSLISWK+KKQ + S SS E+E R+M+
Sbjct: 1340 MFLGDSLISWKSKKQNMASSSSAESEYRAMA 1370


>emb|CAA72990.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 253

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/91 (52%), Positives = 68/91 (74%)
 Frame = -2

Query: 283 FLNSPADSHFQATVHVLQYLKGTINMGLFYPSHNELFLKGYCDSDWGSCAFSTKSLSGYA 104
           F ++P  SH  A   VLQY+KGT+  GLFY +H++L LKG+ D+DW +C  S +S +G+ 
Sbjct: 58  FSSAPRTSHLGAVYKVLQYIKGTVGQGLFYSAHSDLTLKGFADADWAACVDSRRSTTGFT 117

Query: 103 MFLGDSLISWKTKKQKIVSKSSCEAELRSMS 11
           MF+GDSLISW++KKQ  VS+SS EAE R+++
Sbjct: 118 MFVGDSLISWRSKKQPTVSRSSAEAEYRALA 148


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
            (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  108 bits (271), Expect = 4e-22
 Identities = 53/94 (56%), Positives = 67/94 (71%)
 Frame = -2

Query: 283  FLNSPADSHFQATVHVLQYLKGTINMGLFYPSHNELFLKGYCDSDWGSCAFSTKSLSGYA 104
            F  +P  +H QA   +LQY+KGTI  GLFY + +EL LK Y ++D+ SC  S +S SGY 
Sbjct: 1120 FSMAPRKAHLQAVYKILQYIKGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYC 1179

Query: 103  MFLGDSLISWKTKKQKIVSKSSCEAELRSMSQTT 2
            MFLGDSLI WK++KQ +VSKSS EAE RS+S  T
Sbjct: 1180 MFLGDSLICWKSRKQDVVSKSSAEAEYRSLSVAT 1213


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