BLASTX nr result

ID: Angelica22_contig00048161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00048161
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524843.1| pentatricopeptide repeat-containing protein,...   113   1e-23
ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat...   111   7e-23
emb|CBI28823.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_004171455.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    92   3e-17

>ref|XP_002524843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535903|gb|EEF37563.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 524

 Score =  113 bits (283), Expect = 1e-23
 Identities = 62/106 (58%), Positives = 75/106 (70%), Gaps = 4/106 (3%)
 Frame = -2

Query: 308 LQLLQKYIKHSKQINQIHAFLVTNNLLLFNPT-SSPFKWMSTLLYNTLIRAYLNIHKPHN 132
           LQLLQ++IK   Q+ QIH+ L+T   LLFNPT SS  KW STL YNTL RAYLN  + +N
Sbjct: 10  LQLLQRFIKCQNQVEQIHSLLLTKAHLLFNPTISSHSKWKSTLFYNTLTRAYLNFGQTYN 69

Query: 131 SLVLYKHMLVHQVPPNSHTFPSLVKAALHFMFPE---SLYGQVLKR 3
           ++ L+  ML HQ PPNSHTFPSL+KAA    FP    SL+ QV+KR
Sbjct: 70  TVYLFTLMLAHQTPPNSHTFPSLIKAAT-LSFPSIGTSLHTQVIKR 114


>ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g10330-like [Vitis vinifera]
          Length = 531

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/108 (51%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
 Frame = -2

Query: 308 LQLLQKYIKHSKQINQIHAFLVTNNLLLFNPTSSPFKWMSTLLYNTLIRAYLNIHKPHNS 129
           L+LLQ  IKH KQI Q+H+ L+TN  LL    +S  KWM+TLLYN+LIR YLN  +PH +
Sbjct: 17  LRLLQGLIKHPKQIKQVHSLLITNGHLLPCSNASNLKWMATLLYNSLIRGYLNFVEPHKT 76

Query: 128 LVLYKHMLVHQVPPNSHTFPSLVKAA------LHFMFPESLYGQVLKR 3
           L+++ HML HQ PPN+ TFPS++K A      L FM    L+  V+KR
Sbjct: 77  LLIFTHMLAHQAPPNNLTFPSIIKKAASCSPSLAFMIGTPLHTHVIKR 124


>emb|CBI28823.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/108 (51%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
 Frame = -2

Query: 308 LQLLQKYIKHSKQINQIHAFLVTNNLLLFNPTSSPFKWMSTLLYNTLIRAYLNIHKPHNS 129
           L+LLQ  IKH KQI Q+H+ L+TN  LL    +S  KWM+TLLYN+LIR YLN  +PH +
Sbjct: 17  LRLLQGLIKHPKQIKQVHSLLITNGHLLPCSNASNLKWMATLLYNSLIRGYLNFVEPHKT 76

Query: 128 LVLYKHMLVHQVPPNSHTFPSLVKAA------LHFMFPESLYGQVLKR 3
           L+++ HML HQ PPN+ TFPS++K A      L FM    L+  V+KR
Sbjct: 77  LLIFTHMLAHQAPPNNLTFPSIIKKAASCSPSLAFMIGTPLHTHVIKR 124


>ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|222874920|gb|EEF12051.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 5/107 (4%)
 Frame = -2

Query: 308 LQLLQKYIKHSKQINQIHAFLVTNNLLLFNPTSSP---FKWMSTLLYNTLIRAYLNIHKP 138
           LQLLQ +IKH  Q+ QIH+ L T  LL +NP +SP    KW +TLL+NTL RAYLN  + 
Sbjct: 10  LQLLQHFIKHQNQVKQIHSLLTTKGLLFYNPNTSPNDNSKWKTTLLFNTLNRAYLNFGQH 69

Query: 137 HNSLVLYKHMLVHQVPPNSHTFPSLVKAALH--FMFPESLYGQVLKR 3
             +L L+  ML HQ PPNSHTFPS++KAA H       SL+ Q + R
Sbjct: 70  QQTLHLFALMLAHQTPPNSHTFPSVIKAATHSCLFIGTSLHTQAINR 116


>ref|XP_004171455.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g10330-like [Cucumis
           sativus]
          Length = 477

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
 Frame = -2

Query: 308 LQLLQKYIKHSKQINQIHAFLVTNNLLLFNP-TSSPFKWMSTLLYNTLIRAYLNIHKPHN 132
           LQLLQ+++K+S +I QIHA L+T   L  N  TSS  K + TLLYNTLIRAYLN ++P  
Sbjct: 11  LQLLQRFLKNSTKIPQIHALLLTQGHLFNNSQTSSNPKCLITLLYNTLIRAYLNFNRPRF 70

Query: 131 SLVLYKHMLVHQVPPNSHTFPSLVKAA 51
           +L+LY  ML  Q  PN HTFPS++K+A
Sbjct: 71  ALLLYTQMLSQQTKPNFHTFPSIIKSA 97


Top