BLASTX nr result

ID: Angelica22_contig00047996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047996
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   4e-10
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg...    68   9e-10
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   1e-08
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    60   2e-07
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 60   2e-07

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
 Frame = +1

Query: 7   LQKVNFPSRFITWVKACVCNPMHSIKTNVL*MVIFQVLK-V*DKDTTCLLTYSASMNVLS 183
           L+++ FPS FI W+ ACV    +SI  N +  + F   K +   D      ++ SM  LS
Sbjct: 604 LKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYLS 663

Query: 184 -CLLNS-PNTNFDYH*KCKELRLTHLFFADDVLLFSHGDKDSIS 309
            C+ N   +  F++H KC+ ++LTHL FADD+L+F+  D  SIS
Sbjct: 664 RCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSIS 707


>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
           gi|346683183|ref|YP_004842114.1| hypothetical protein
           BemaM_p069 [Beta macrocarpa]
           gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
           hypothetical protein [Beta macrocarpa]
          Length = 238

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
 Frame = +1

Query: 7   LQKVNFPSRFITWVKACVCNPMHSIKTNVL*MVIFQVLK-V*DKDTTCLLTYSASMNVLS 183
           L ++ FPS+FITW+  CV    +SI  N      F   K V   D      ++  M  LS
Sbjct: 67  LSELGFPSQFITWIMECVTTVSYSILLNGKPTTPFPSKKGVRQGDPMSPFLFAIGMEYLS 126

Query: 184 -CLLN-SPNTNFDYH*KCKELRLTHLFFADDVLLFSHGDKDSI 306
            CLL  + N NF+YH +C++L +TH+ FA D+LLFS  D  S+
Sbjct: 127 RCLLELTLNPNFNYHPRCEKLAITHMMFASDLLLFSRADTRSV 169


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
 Frame = +1

Query: 7   LQKVNFPSRFITWVKACVCNPMHSIKTNVL*MVIFQVLK-V*DKDTTCLLTYSASMNVLS 183
           L +  FPSRF+ W+  CV    +S+  N +    FQ  K +   D      ++  M  LS
Sbjct: 601 LYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLS 660

Query: 184 CLLNS--PNTNFDYH*KCKELRLTHLFFADDVLLFSHGDKDSI 306
             L     + +F++H KC+ L +THL FADD+L+F   DK S+
Sbjct: 661 RCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSL 703


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
 Frame = +1

Query: 7    LQKVNFPSRFITWVKACVCNPMHSIKTNVL*MVIFQVLKV*DKDTTCLLT---YSASMNV 177
            L+ ++ P  FI W++ C+     S++ N      F+  +       C L+   Y   MNV
Sbjct: 763  LKAIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSER--GLRQGCSLSPYLYVICMNV 820

Query: 178  LSCLLNSP--NTNFDYH*KCKELRLTHLFFADDVLLFSHGDKDSI 306
            LSC+L+         YH +C+ + LTHL FADD+++FS G   SI
Sbjct: 821  LSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSI 865


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
 Frame = +1

Query: 7   LQKVNFPSRFITWVKACVCNPMHSIKTNVL*MVIFQVLKV*DKDTTCLLT---YSASMNV 177
           L+ +NFP  F  W+K C+     S++ N      F   +       C L+   +   MNV
Sbjct: 189 LEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKR--GLRQGCALSPYLFVICMNV 246

Query: 178 LSCLLN--SPNTNFDYH*KCKELRLTHLFFADDVLLFSHGDKDSI 306
           LS +++  + + N  YH KCK+L LTHL FADD+++F  G + S+
Sbjct: 247 LSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSV 291


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