BLASTX nr result

ID: Angelica22_contig00047935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047935
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   121   7e-26
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   115   4e-24
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...   113   1e-23
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   113   1e-23

>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  121 bits (303), Expect = 7e-26
 Identities = 66/158 (41%), Positives = 93/158 (58%)
 Frame = -1

Query: 484  IFSYGDKASIQHTMSCLDKFTDLSGLHPSLHKSTIFFANCKPEVISWFDAEFFIPHG*LS 305
            +FS G   SIQ T++  +KF  +S L  SL KSTIF A   P   +    +F    G L 
Sbjct: 856  VFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLP 915

Query: 304  VKFLGVPLISSKLSVNDCIPLIDKLTSRIYSWTTILLFLAGRTQLIKSVLFSIQAYWTNH 125
            VK+LG+PL++ +++ +D +PL++K+ +RI SWT   L  AGR QLIKSVL SI  +W + 
Sbjct: 916  VKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSV 975

Query: 124  FLLPNAVHKRIQTIFTRF*WKGDPDAKGGARIGWLTVC 11
            F LP A  + I+ +F+ F W G       A+I W  VC
Sbjct: 976  FRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVC 1013


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  119 bits (297), Expect = 3e-25
 Identities = 67/148 (45%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
 Frame = -1

Query: 436 LDKFTDLSGLHPSLHKSTIFFA---NCKPEVISWFDAEFFIPHG*LSVKFLGVPLISSKL 266
           L KF DLSGL+P+ +KS IF +   N + E I           G L +K+LGVPL+SS+L
Sbjct: 12  LTKFQDLSGLYPNPNKSDIFLSGVLNAEREQIIHI---LGFREGELPMKYLGVPLLSSRL 68

Query: 265 SVNDCIPLIDKLTSRIYSWTTILLFLAGRTQLIKSVLFSIQAYWTNHFLLPNAVHKRIQT 86
               C  L+D++TS++  WT   L  AGR QLI SVLFSIQ YW + FLLP  V K ++ 
Sbjct: 69  KAIYCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQ 128

Query: 85  IFTRF*WKGDPDAKGGARIGWLTVCLPR 2
           I   F W G      GA++ W  VCLP+
Sbjct: 129 IMKSFLWSGSDMRTTGAKVAWDQVCLPK 156


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/161 (36%), Positives = 91/161 (56%)
 Frame = -1

Query: 484  IFSYGDKASIQHTMSCLDKFTDLSGLHPSLHKSTIFFANCKPEVISWFDAEFFIPHG*LS 305
            +FS G   S++  ++    F   SGL+ SL KST+F A+   E  +   A F    G L 
Sbjct: 964  VFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLP 1023

Query: 304  VKFLGVPLISSKLSVNDCIPLIDKLTSRIYSWTTILLFLAGRTQLIKSVLFSIQAYWTNH 125
            V++LG+PL++ ++++ DC+PL++K+ SRI SW    L  AGR QL+ SV+ S+  +W + 
Sbjct: 1024 VRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISA 1083

Query: 124  FLLPNAVHKRIQTIFTRF*WKGDPDAKGGARIGWLTVCLPR 2
            F LP A  + I+ I   F W G       A++ W  VC P+
Sbjct: 1084 FRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCKPK 1124


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/135 (41%), Positives = 80/135 (59%)
 Frame = -1

Query: 409 LHPSLHKSTIFFANCKPEVISWFDAEFFIPHG*LSVKFLGVPLISSKLSVNDCIPLIDKL 230
           L  +L KS+IF         S   A      G L V++LG+PL+  +L   DC PLI ++
Sbjct: 1   LFANLAKSSIFLVGVNSSKASRLAANMGFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRI 60

Query: 229 TSRIYSWTTILLFLAGRTQLIKSVLFSIQAYWTNHFLLPNAVHKRIQTIFTRF*WKGDPD 50
           TSRI SW+  +L  AGR QL++SVL S+Q YW + F+LP  VH+ +  I   + W+G  +
Sbjct: 61  TSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEE 120

Query: 49  AKGGARIGWLTVCLP 5
            +GGA++ W  VCLP
Sbjct: 121 GRGGAKVAWDEVCLP 135


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/154 (38%), Positives = 84/154 (54%)
 Frame = -1

Query: 484  IFSYGDKASIQHTMSCLDKFTDLSGLHPSLHKSTIFFANCKPEVISWFDAEFFIPHG*LS 305
            +F+  D +SI   M+  + F+  SGL  S+ KS I+F     E          +P G L 
Sbjct: 697  MFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLP 756

Query: 304  VKFLGVPLISSKLSVNDCIPLIDKLTSRIYSWTTILLFLAGRTQLIKSVLFSIQAYWTNH 125
             ++LGVPL S KL+ + C PLIDK+T+R   W   LL  AGR QL+K++L+S+Q YW   
Sbjct: 757  FRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQI 816

Query: 124  FLLPNAVHKRIQTIFTRF*WKGDPDAKGGARIGW 23
            F LP  + K ++T   +F W G  D    A + W
Sbjct: 817  FPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAW 850


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