BLASTX nr result

ID: Angelica22_contig00047885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047885
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat...   173   1e-41
emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]   173   1e-41
ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat...   165   3e-39
ref|XP_003621847.1| Pentatricopeptide repeat-containing protein ...   160   8e-38
ref|XP_002308767.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36

>ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Vitis vinifera]
          Length = 457

 Score =  173 bits (438), Expect = 1e-41
 Identities = 78/108 (72%), Positives = 100/108 (92%)
 Frame = -1

Query: 324 QLQKAEAVLISGIRIGVLPDVVSYNTLVAAYCRFVGLDAGYSVLYRMKEAGIHPNVVTFN 145
           QL+KAEAV+I GIR+G+LPDVV+YNTL++AY RFVG+DA YSV++RMKEAGI P+V+T+N
Sbjct: 22  QLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYN 81

Query: 144 SLMAGAARRCLLTRFFNLFDEMLQTGVRPDVWSYNTLMNCFFKLGKPD 1
           SL+A A +RCLL+R  +LF+EML+TG+RPDVWSYN+LM+CFFKLGKPD
Sbjct: 82  SLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPD 129


>emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
          Length = 457

 Score =  173 bits (438), Expect = 1e-41
 Identities = 78/108 (72%), Positives = 100/108 (92%)
 Frame = -1

Query: 324 QLQKAEAVLISGIRIGVLPDVVSYNTLVAAYCRFVGLDAGYSVLYRMKEAGIHPNVVTFN 145
           QL+KAEAV+I GIR+G+LPDVV+YNTL++AY RFVG+DA YSV++RMKEAGI P+V+T+N
Sbjct: 22  QLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYN 81

Query: 144 SLMAGAARRCLLTRFFNLFDEMLQTGVRPDVWSYNTLMNCFFKLGKPD 1
           SL+A A +RCLL+R  +LF+EML+TG+RPDVWSYN+LM+CFFKLGKPD
Sbjct: 82  SLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPD 129


>ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449468117|ref|XP_004151768.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449532400|ref|XP_004173169.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
          Length = 456

 Score =  165 bits (418), Expect = 3e-39
 Identities = 76/108 (70%), Positives = 93/108 (86%)
 Frame = -1

Query: 324 QLQKAEAVLISGIRIGVLPDVVSYNTLVAAYCRFVGLDAGYSVLYRMKEAGIHPNVVTFN 145
           Q+QKAEAV+I GIRIGVLPDVV+YNTL+  YCRF G+DA YSVLYRM+EAGI P+V+T+N
Sbjct: 22  QMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITYN 81

Query: 144 SLMAGAARRCLLTRFFNLFDEMLQTGVRPDVWSYNTLMNCFFKLGKPD 1
           SL+AGA R   L +  +LF+EMLQ+G+ PD+WSYNTLM+CFF LGKPD
Sbjct: 82  SLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPD 129



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/93 (33%), Positives = 48/93 (51%)
 Frame = -1

Query: 285 RIGVLPDVVSYNTLVAAYCRFVGLDAGYSVLYRMKEAGIHPNVVTFNSLMAGAARRCLLT 106
           R G +P +V+YN L+   C+   L A   +L    ++G+ PN VT+ +LM    R     
Sbjct: 175 RHGFIPQLVTYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYE 234

Query: 105 RFFNLFDEMLQTGVRPDVWSYNTLMNCFFKLGK 7
           R F +F +M   G   D ++Y T+   F KLG+
Sbjct: 235 RGFEIFSKMKNKGYAFDGFAYCTVSGAFLKLGR 267


>ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496862|gb|AES78065.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 457

 Score =  160 bits (406), Expect = 8e-38
 Identities = 69/108 (63%), Positives = 94/108 (87%)
 Frame = -1

Query: 324 QLQKAEAVLISGIRIGVLPDVVSYNTLVAAYCRFVGLDAGYSVLYRMKEAGIHPNVVTFN 145
           Q+ KAE VLI GI++G+ PD+++YNTL+  YCRFVG+DA Y++L RMKEAGI+P+VV++N
Sbjct: 22  QIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYN 81

Query: 144 SLMAGAARRCLLTRFFNLFDEMLQTGVRPDVWSYNTLMNCFFKLGKPD 1
           SL +GA R+CLL +  +LFDEMLQ+G+RPDVWSYN LM+C+F+LGKP+
Sbjct: 82  SLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPE 129


>ref|XP_002308767.1| predicted protein [Populus trichocarpa] gi|222854743|gb|EEE92290.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score =  157 bits (396), Expect = 1e-36
 Identities = 71/107 (66%), Positives = 90/107 (84%)
 Frame = -1

Query: 321 LQKAEAVLISGIRIGVLPDVVSYNTLVAAYCRFVGLDAGYSVLYRMKEAGIHPNVVTFNS 142
           LQ+AE V+I G+R+GVLPDVV+YNTL+ AY RFV  DA YSVL RMKEA I P++VT+NS
Sbjct: 23  LQRAETVIIDGVRLGVLPDVVTYNTLINAYSRFVSFDAAYSVLDRMKEASIKPDIVTYNS 82

Query: 141 LMAGAARRCLLTRFFNLFDEMLQTGVRPDVWSYNTLMNCFFKLGKPD 1
           L+AGA R CLL+   +LF+EML+ G++PD+WSYNTLM+CFFKL +PD
Sbjct: 83  LIAGAMRHCLLSNCMDLFEEMLELGIKPDIWSYNTLMHCFFKLERPD 129


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